Panicum virgatum (switchgrass): 120656507
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Entry
120656507 CDS
T07260
Name
(RefSeq) phenylalanine ammonia-lyase-like
KO
K10775
phenylalanine ammonia-lyase [EC:
4.3.1.24
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00360
Phenylalanine metabolism
pvir00940
Phenylpropanoid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pvir_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
120656507
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
120656507
Enzymes [BR:
pvir01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.24 phenylalanine ammonia-lyase
120656507
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GFIT
Motif
Pfam:
Lyase_aromatic
Ribosomal_L30_N
Motif
Other DBs
NCBI-GeneID:
120656507
NCBI-ProteinID:
XP_039790546
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Position
1N:complement(51280531..51285590)
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AA seq
717 aa
AA seq
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MECETGLVRSLHGDGLCVPAPAAARADPLNWGKAAEDLSGSHLGEVQRMVAEFREPLVRI
QGASLSIAQVAAVAAGAGEARVELDESARGRVKASSDWVMSSMMNGTDSYGVTTGFGATS
HRRTKEGGALQRELIRFLNAGAFGTGADGHVLPAEATRAAMLVRINTLLQGYSGIRFEIL
EAIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVAPDGRKVDAAEAFK
IAGIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLAVMAEVISAVFCEVMTGKPE
FTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQW
LGPQIEVIRFATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLALAAI
GKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNH
VQSAEQHNQDVNSLGLISSRKTAEAIDILKLMTSTFLIALCQAIDLRHLEENMKAAVKNC
VTQVAKKTLSMNAMGGLHIARFCEKDLQTAIDREAVFAYADDPCSPNYPLMQKLRAVLIE
HALANGDAERVVETSIFAKVAEFEQQVRAALPKGVEAARAAVESGNPMVPNRIKECRSYP
LYRFVREELGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcgagaccggcctcgtccgctccctgcacggcgacggcctgtgcgtgccggcc
ccggcggcggcgcgcgccgaccccctgaactggggcaaggccgcggaggacctgtccggg
agccacctgggcgaggtgcagcgcatggtggcggagttccgcgagccgctggtgcggatc
cagggcgcgagcctgagcatcgcgcaggtggccgccgtggccgccggcgccggcgaggcc
cgagtcgagctggacgagtccgcgcgcggccgcgtcaaggccagcagcgactgggtcatg
agcagcatgatgaacggcaccgacagctacggcgtcaccaccggcttcggcgccacctcc
caccgccgcaccaaggagggcggcgcgctccagcgggagctcatcagattcctcaatgcc
ggcgccttcggcaccggcgccgacggccacgtgctgccggcggaggccacccgcgcggcg
atgctcgtgcgcatcaacaccctcctgcagggctactccggcatccgcttcgagatcctc
gaggcaatcgccaagctgctcaacgccaacgtcaccccgtgcctgccgctccggggcacc
atcaccgcgtcaggcgacctcgtcccgctctcctacatcgccggcctcatcacgggccgc
cagaactccgtcgcggtcgcccccgacggcaggaaggtggacgccgccgaggcgttcaag
atcgccggcatcgagcacggcttcttcgagctgcagcccaaggaagggctcgccatggtc
aacggcaccgccgtgggctctggcctcgcgtcgaccgttctctttgaggccaacgtgctc
gccgtcatggccgaggtcatctccgcggtgttctgcgaggtcatgaccggcaagccggag
ttcaccgaccacctgacccacaagctcaagcaccacccgggacagattgaggctgccgct
atcatggagcacatcttggaaggcagctcctacatgaagctggccaagaagctcggcgag
ctcgacccgctgatgaagccgaagcaggacagatacgcgctccgcacctcgccgcagtgg
ctcggcccacagatcgaggtcatccgcttcgccaccaagtccatcgagcgcgagatcaac
tccgtcaacgacaacccgctcatcgacgtctcccgtggcaaggcgctccacggtggcaac
ttccagggcactcccatcggcgtgtccatggacaacacccgtctcgccctcgccgccatc
ggcaagctcatgttcgcgcagttctccgagctggtgaacgacttctacaacaatggcctg
ccctccaacctgtctggtggtcgcaacccgagcttggactacggtttcaagggcgccgag
atcgccatggcttcctactgctctgaactccagttcctgggcaaccccgtgaccaaccat
gtccagagcgcggagcagcacaaccaggacgtgaactcgctgggcctcatctcctccagg
aagaccgccgaggccatcgacatcctgaagctcatgacctccacgttcctgatcgccctg
tgccaggccatcgacctgcgccacctggaggagaacatgaaggccgcggtgaagaactgc
gtgacgcaggtggccaagaagaccctgagcatgaacgccatgggcgggctccacatcgcg
cgcttctgcgagaaggacctgcagacggcgatcgaccgcgaggcggtgttcgcgtacgcg
gacgacccgtgcagccccaactacccgctgatgcagaagctccgcgcggtgctgatcgag
cacgcgctggccaacggcgacgccgagcgcgtcgtggagacgtccatcttcgccaaggtg
gccgagttcgagcagcaggtccgcgccgcgctgcccaagggggtggaggccgcgcgcgcc
gccgtggagagcggcaaccccatggtccccaaccggatcaaggagtgccgctcgtacccg
ctgtaccggttcgtccgcgaggagctcggcaccgagtacctgaccggcgagaagacccgg
tcgcccggcgaggagctcaacaaggtgctggtggccatcaaccagcgcaagcacatcgac
ccgctgctcgagtgcctcaaggagtggaacggtgagcccctgccgctctgctga
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