Panicum virgatum (switchgrass): 120656685
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Entry
120656685 CDS
T07260
Name
(RefSeq) ceramide kinase-like isoform X1
KO
K04715
ceramide kinase [EC:
2.7.1.138
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00600
Sphingolipid metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120656685
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.138 ceramide kinase
120656685
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GFIT
Motif
Pfam:
DAGK_cat
CERK_C
Motif
Other DBs
NCBI-GeneID:
120656685
NCBI-ProteinID:
XP_039790799
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Position
1N:complement(53854492..53862295)
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AA seq
616 aa
AA seq
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MQDGGEVLFLDGIGEVVVSIGCSGLSLQPLHPELVSSCWSSITLQPKLDNKIKFSDVYGV
ELLDKGPICGPWNTRTAIQGKKNIEMHRFVVHGITRTRKRPSPWVPCEYIFGHKDLKTCK
NWFERLMACINNEGDRPKNLMVFVHPLCGKGRGVRNWETVALLFDRAKIKTKVIVTDRAG
HAYDTLVSLSDIELKALDGVVAVGGDGLFNEILNGILSSRYKASYPPTPEGFGYFGSNEN
CEEQKRNGLNCSMPTPDSVNTTFPGNSTKCDDHEPLLSTSQPTGLEIPSLIFWWFLVADT
NKEPCIGEQDHIVSFPNDWFRLGIIPSGSTDAIVLSTTGERDPVTSALLIILGRRMSLDI
AQVVRWKSSPTAEVLPTVRYAASFAGYGFYGEVIRESENYRWMGPARYDFSGTMVFLRHR
SYEAKVAFLETPNSNPLAASAEDDVTGAQPLQSHQRRPRRIICRTNCFVCKEALTSGQNS
EDEVADSSRTICENPKWVWSEGHFLSVGAAVISCRNERAPDGLVADAHLSDGFLHLLLIR
DCPLPLYLWHLTQFTKKGSDPLSFKFVEHHKTPAFTFISSHDESVWNLDGEIFQACEVSV
QACRGLVNLFASGPEV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacggcggggaggtgctgttcctggacggcatcggggaggtcgtcgtctccatc
ggctgcagcggcctctctctacagcctctccatccggaactggtctcttcatgttggtca
tctattacactgcagcctaaattggacaacaaaatcaagttttcagatgtttacggtgta
gagctgctcgataagggtcctatctgtgggccttggaatacaagaactgctattcaaggc
aagaaaaatattgagatgcaccgatttgttgtacatgggattaccagaacaagaaaacgt
ccttctccatgggtaccttgtgaatatatttttggtcacaaagacttgaagacctgcaaa
aattggtttgagcgtctcatggcatgcataaacaatgaaggcgatagaccaaagaacctg
atggtatttgttcatccattatgtggaaaaggtagaggggtcaggaattgggaaacagta
gccctattatttgatagagcgaaaataaaaacaaaggtgatagtgacagatagagcaggg
catgcatacgacacgctggtatcattatcagatatagaactgaaggcacttgatggtgtt
gttgcagtgggtggtgacggtctatttaatgaaattctgaatgggatacttagttcaagg
tacaaggcttcttatcctccaactcccgaggggtttggatattttgggagcaatgaaaat
tgtgaagaacaaaaaaggaatgggctgaactgtagtatgccgacaccagattctgtgaat
accacgtttcctgggaattcaacaaaatgtgatgatcatgaacctcttctttcaacttca
caacctacaggactagagataccatcattaatattttggtggtttcttgttgcagatact
aataaagaaccatgcattggagaacaggatcatatcgtctctttcccaaatgactggttc
agacttggtataattccttctggctcaactgatgctattgttctcagcacaactggggag
cgagatcctgtgacctctgctctgcttattattctcggcagaaggatgtcacttgatata
gctcaagtagtcagatggaaaagtagcccaacagctgaggtcttgcctactgtacgctat
gctgcttcatttgcaggatatgggttttatggagaagttatcagggagagcgaaaactac
cggtggatgggtcctgcacgttatgacttttctggaacaatggtctttctgaggcatagg
tcgtacgaggcaaaggttgcttttcttgagactccaaacagtaatccacttgcagcatca
gcagaggatgatgtaactggagcacaaccactacaatctcatcagaggagacctcgcaga
ataatctgccgaacaaattgctttgtatgcaaagaggctttgacatctggacaaaattca
gaagatgaggttgcagacagctccagaacaatatgcgagaacccaaagtgggtctggtcc
gaaggacatttcctcagcgttggtgcagctgtcatttcgtgccgtaatgaaagagcccca
gacggcctggtagctgatgcacacctctcggatggttttcttcatcttctgctcatcaga
gactgccctcttcccctttatttatggcatctaacacagtttaccaagaagggttcagac
cctttgagcttcaagtttgtggagcatcacaagacaccagcattcacatttatctcatca
catgatgaaagtgtctggaacttggatggagagatttttcaggcgtgtgaggtatctgtc
caagcttgccggggccttgtaaacctctttgcttcaggaccagaggtgtag
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