Panicum virgatum (switchgrass): 120657316
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Entry
120657316 CDS
T07260
Name
(RefSeq) separase-like isoform X1
KO
K02365
separase [EC:
3.4.22.49
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120657316
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120657316
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.49 separase
120657316
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C50: separase family
120657316
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
Separase
120657316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Separin_C
TPR_ESP1
TPR_10
TPR_ESP1_2nd
CHAT
Motif
Other DBs
NCBI-GeneID:
120657316
NCBI-ProteinID:
XP_039791544
LinkDB
All DBs
Position
1N:complement(62890050..62907358)
Genome browser
AA seq
2209 aa
AA seq
DB search
MEAAAADLLAALSSPSSHAGLRSRFKAYLQPFTPYLSTANPNPKPPPKRATKQNKQPPPP
PPDAATLRPLAKRFLPFIARALQLLPTLVRASPGSGDAGGGASDDLLEIYGLLLDSLEAI
SPCLAGKPYSALLQRGRFVCCLESRGHLARANAEATAALDALRSSLSPPTTSTKSRRGAP
NVAPIILPDPGSAGDAGADPEVTILAVELTVCLANCASKGNVKEAAPYERVLSLVEQLKP
WLRIPADDVSTKYRTLLVNAMSRCSLFLVSESSSFNSDDLVHKFCVSTIQEYVEAQMIER
LPAVCVARKICSSVDFSWGGSTKLLLHVLKNIADSVVCVKADLPKAVNEFLVFVSCFARC
ILSANRDLCVGASELLYEHGGYFPEVSSHTASVLRLYATGLYFCTQKEGSEMPCLSADIL
NNEKYLQALDKAVRSLAQMSHDSISLLAYLDSMEFVCKVLLQHASAVWKNFSEGEAIHYS
GNMDSILTTLHHFIDSSLKAYSCTKMSECDNERLLEQRGTLLKTLVSTTKISFVTNKDVK
ESLAAINSAISSKWITFEERKFLISSLGNIGVTLYNTGHYKEAPKALELCCHAICAHVRF
SYCGLLSRTEGNRTMEHLSKDTLKYIIFDAFARIAKMVETLHRCGSKRTHEIVAMSLSKL
LADDDMSEYFESSLILIKLWVKITRKDFEGNQGVDSPPLLYHSLLDCLSPIPKKLIGLIL
EQELLAYGLMETRGSKFSTEMQIRVIDVLLDKIYYSEEHCLQRSRFLVRKAGALRACGVQ
NIESCLKSLSEAISLLQTISKNSSQSNTIVINQLAIAQCLHAHCTLEGNPVCEVIFKNIN
SALSSWSKVETFDYSSRGSVLQRASQTIVPLLCSLVDLLAMKGCFKLQFDLCELMIKIWK
QENLPLEKIFSFLFTSGRLSHAYCHLPLDKEFISKVAEHVGVDCHHTDFWRNCFEGERPS
LIMFLQRMLLSDLFFPQSCEQSLRFDVSVDEVNKAALSLVSEATSNDQAIFLAGYIYYDL
SERLFSCGQILQALSYGKEALHLRKKLLKKKFKLSLGSSGNMESQCCGQDFGSLEAWGPT
IAEIWPDSSTSTSIRDSFLTSWSVLRCYLESTLQVAMMHELIGNGTEAEVLLRTGKEISN
FHGLLVFSIAFTSSLGQLYSKRQLWDEADSELKHAQDLLLEHDAIVSCKLCKLTLEISVD
MKVGDLFWSRFEKDFQKLSTVNLPMAFGMYRSAIEKLNSTDVELFTGSFGTLKTACHVCS
KDFIVSTEHGVCSGKEPVVSNDGMLPPCSVCVLLRQASVDHFDELTALKARMEITNAEAG
PPLDVKAKRTSRNSSRLAKEHNAETNAETNAKTRTRSSKRTVHAKRDGLPADALVGGESE
CFPGSIDLRKDGLCNMFGCWKCLVVKSLNSGCIQNILQFRWDCVRRRFHVSLLLKIARAL
RSHRGNYGDHEVHSVYWQCISLLYFRSLPQGCYKTYEPHLVGLIMDGSASDFFPLEHAEI
LCSMSFFLLKGSLSEQSRDVCCCLSTVQISDVVTWLLKAFVLSRESPSLCQEICKLLACT
LLLSTTGSSIHLPLCSQESLSLSHWAAYFHQMSVGAYHNYHYPASFQALPRKKFSKGTLE
NSRSEKHEGVSEFLRFPSMDINHIEKDIIEFFQKLPDVPVVCISMIGGDYVDVLEEFLLL
PSSFPAWMLLSRFDSACKPTTMLLPVIAISEEMQSADSSIKDLGNPMKFDKKWQCPWGYA
VTDYVAPIFKNILEENFVSLSSATITTNAVQADHVRWWSHRMKLNNYLDCTLKNMEKSWF
GPWKCLLLGHQLSDKDIDAASASIITGLETKLEVNPTLIKAIIGGALSVDEVQECVHQLV
LYKGYFGRGGCCGKDRLRAFSSCQIEDEALETLKCLITNALYELPEPADRDPVILVLDVN
VQMLPWENLPVLRNQEVYRMPSMGCIFLALSRNKDDSAIAPPFPVIDPSNTFYLLNPSGD
LRSTHEEFHELFRNYEWEGMAGPWDGQKTKELVLALTNHDLFLYFGHGSGTQYVSGKEIE
KLNNCAAALLMGCSSGTLHCKGSYAPRGAPLSYLFAGSPAIIANLWDVSDKDIDRFSKAL
LNSWLRENFTDDNSCSKCSLLTQEFESLNIASKDNGRARRRGTRGKKPQQINDSTKCCSC
RQRRIASYLSEARRACRLPFLIGASPVCYGVPTIIRKKVMTDSVTGDER
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgccgccgccgacctcctcgccgccctctcgtccccgtcgtcccatgccggc
ctccgttcccggttcaaggcctacctccagcccttcaccccctacctgtccaccgcaaac
cctaaccccaagccgccgccgaagagggcgacgaagcagaacaagcagccgccgccgccg
ccacccgacgcggctaccctccgcccactcgcgaagcgattcctcccgtttatcgcccgc
gcgctccagctcctcccgacgctcgtccgcgcgagtcctggctcgggcgacgcgggtggt
ggggcctccgacgatctcctcgagatctacggcctcctcttggattccctcgaggccata
tcaccctgcctcgcggggaagccctactctgcgctacttcagcggggccgcttcgtgtgc
tgcctggagtcgcgcggccaccttgctcgcgccaatgcggaggcgaccgctgccctcgac
gcgctccgctcctcgctctctccacccaccacgagcaccaagtcacgacgaggtgctcca
aacgttgctcccatcatccttccggaccctggaagcgctggggatgctggcgcggaccct
gaagtcaccatcctcgcggtcgagctcacagtttgccttgctaattgtgccagcaagggc
aacgtgaaggaagctgccccttacgaacgggtgctcagtctggttgagcagctcaagcca
tggcttcggattccggctgatgacgtcagcacgaagtatcgcacgcttcttgtgaatgca
atgagccgctgctcccttttccttgtttctgagtcttcatccttcaacagtgatgatctg
gtgcataaattctgtgtctctacgatacaagagtatgtggaggcacagatgattgagcgt
ttgccagctgtatgtgttgctcgcaagatttgctcttctgtagatttcagttggggaggg
agcacaaagcttttgctccatgtattaaaaaacatagctgattctgttgtatgtgtaaag
gctgacttaccgaaagctgtcaatgagtttttggtatttgtatcatgttttgctcggtgc
attctttctgctaatagggatttatgtgttggagcttcagagctactttacgaacatggt
ggctatttccctgaggtttcctctcatactgcttcagtccttcgtctttatgcgactgga
ttatacttttgtacccagaaagagggaagtgaaatgccctgtttgtctgcagacattctg
aacaatgaaaagtatttacaagctttagacaaagcagttaggtcactggcacagatgtcg
catgatagtatatctttgttggcatacttagattctatggagtttgtttgcaaggtgttg
ttgcagcatgctagtgcagtttggaagaacttctctgaaggagaagcaatccattattct
ggaaacatggattctatcttgacaacactgcatcacttcatcgattccagcctcaaggct
tatagctgtacaaaaatgtctgaatgtgacaacgagagactgcttgaacagcgtggaaca
ttactaaaaacccttgtttcgacgactaaaatttcttttgttaccaacaaagatgtcaag
gaaagcctggccgcaatcaattctgctatttcaagtaaatggataacgttcgaggagcga
aaattcttgatatcttcacttggcaacattggagtgacactctataatactgggcattac
aaagaggcaccaaaagctttggaactatgctgccatgcaatatgtgcgcatgtcaggttt
tcttactgtggattattgtcaaggacagaaggaaacagaactatggagcatttgtcgaag
gatacgttgaaatatatcatttttgatgcatttgcacgaattgcgaagatggttgaaact
ctacatagatgtggatcaaaaaggacacacgagattgttgcaatgagcttgtctaaattg
ttggctgatgacgacatgtctgaatattttgaaagttctttgatactgatcaagttgtgg
gttaagataacacgcaaagattttgagggtaatcaaggtgtggatagtccaccacttctg
tatcactctcttttggactgcttgtctcccataccgaaaaaattgataggcttaattcta
gagcaggagttgttagcatatggattgatggaaactcgaggctcaaaattcagtactgaa
atgcagataagggtcatagatgttcttttggataaaatttactattcagaagaacattgt
ttgcagagatcaaggtttcttgtcagaaaggctggtgcacttcgtgcatgtggagtgcaa
aacatagaaagctgcctcaagtcattatccgaagccatatcgttactgcaaaccatctca
aagaattcatctcaaagcaacacaattgtgatcaatcaactggctattgctcaatgcttg
catgcccattgtaccctggaaggcaatcctgtttgtgaggtaatatttaaaaatattaat
agtgcattgagctcgtggtcaaaagtggagactttcgattattcttctcgtggttcagtc
ttgcaacgggcatcacaaactattgtaccacttctttgttccctggttgatttgttggct
atgaagggctgctttaagcttcaatttgacttgtgcgagcttatgataaagatatggaag
caagaaaacctaccccttgaaaagatattttcctttctgttcaccagtgggcgccttagc
catgcatactgtcatctcccattggacaaggaatttatttctaaagttgcagagcatgtt
ggtgtagattgccaccatactgatttttggagaaactgttttgaaggagaacgtccttct
ctcattatgtttcttcagagaatgttgctgagtgacttattttttcctcaatcttgtgaa
caatccttacgttttgatgtcagtgttgatgaggtcaataaggctgccttatctctggtt
tctgaagctacttcaaatgaccaagcaatttttctagctggatacatatactatgattta
tcagaaagacttttttcatgtggacaaattctccaggccttgtcgtatggaaaagaagca
ctccatttgcgcaaaaagctcctaaaaaagaaattcaaacttagtttgggcagctctgga
aatatggaaagccaatgttgtggacaggactttggttctcttgaagcatggggaccaaca
atagctgaaatttggccagattccagtacttcaaccagcattagggattctttccttact
tcatggagtgtacttagatgctatcttgagagcactttacaggtcgctatgatgcacgaa
ttaattggtaatggcactgaagcagaagttctgttacggactggaaaagagatatcaaat
tttcatgggctattggtcttcagtattgcttttacatcatcgctaggtcaattatacagc
aagcgacagctatgggatgaagcagatagtgaacttaaacatgcccaagatcttcttcta
gaacatgatgccattgtttcatgtaagctgtgcaagttaactttggagatatcagtcgac
atgaaagttggtgatctgttttggagtcgctttgaaaaagatttccagaaactgtcgaca
gttaatttgcctatggctttcggcatgtaccgatctgcaatagagaaattgaacagcacc
gatgtggaactttttactgggtcctttggtaccctaaaaactgcttgtcatgtgtgcagc
aaagattttattgtatcaactgagcatggggtttgtagtgggaaagaaccagtagtttca
aatgatggtatgctacctccttgcagtgtttgtgtgttgttgagacaagcatccgttgat
catttcgacgagctcactgcattgaaagctcgaatggaaatcacgaatgctgaagcaggt
ccaccattagatgttaaagctaagaggacatccagaaattcatcacgtttagctaaggaa
cataatgcagagactaatgcagagactaatgcaaagactaggactcgctccagtaagcga
actgtacatgcaaaacgtgatggattgcctgcagatgctttagttggtggtgaatcagag
tgtttccctggcagcattgacctcaggaaagatggcctgtgcaatatgtttggctgctgg
aaatgtcttgtggttaaatcactcaattctgggtgcattcaaaatattttgcagttcaga
tgggattgtgttcgccggcgcttccatgtgtcacttctattgaaaatagctagagccttg
agatctcacaggggaaattatggggatcatgaagtccatagtgtctattggcagtgcata
tcattgttgtacttcagatcccttccacagggttgttataaaacctatgagcctcatttg
gttggactaatcatggatggaagtgctagtgatttttttcctttagagcatgcagaaata
ttatgcagcatgagcttctttttgctaaaaggctccctttctgaacagtcaagggatgtc
tgttgctgcctctctactgtacaaatatcggatgttgttacctggttgctcaaagctttt
gttctatccagggagagtccctcactttgtcaggagatttgcaagttacttgcatgcaca
ctcttgttatcaacgacaggttcctccatccacttgcctttatgttctcaagaatctctt
tcgttgagtcattgggctgcatatttccatcaaatgtctgttggagcttatcacaattat
cattaccctgctagttttcaagcgctgcccaggaaaaagttttcgaagggcacccttgaa
aattctagaagtgagaagcacgagggtgtctcagaatttctcaggtttccatccatggac
ataaaccatattgagaaagatataatagagttcttccaaaagcttccagatgtaccagtt
gtgtgcattagtatgattggaggagattatgttgatgtcctcgaggaatttcttctcctt
ccttcctcttttcccgcttggatgttgctttcaaggtttgattcagcttgcaaaccaact
acgatgcttcttccagtgattgcaatttcagaagaaatgcaatctgctgattcttccatc
aaagatttgggcaatccaatgaaatttgataagaagtggcagtgcccttggggttatgca
gttacagactatgtggccccaattttcaaaaatatactcgaggagaattttgtatccctc
tctagtgcaacgatcacaacaaatgctgtgcaagctgatcacgtcaggtggtggtcgcat
agaatgaagctcaacaactaccttgattgcacactaaaaaacatggaaaaatcttggttt
ggaccctggaaatgccttctcttgggccaccaattatctgataaagacattgatgcagcc
tcggcaagtattataactggtctggaaacaaaattggaagttaatccaacgctcatcaag
gctatcattggcggtgctttatcggtggatgaagttcaagaatgtgttcatcagctcgtt
ttgtataaaggttactttggaaggggagggtgctgtgggaaagatagacttagagctttc
tcttcctgccagattgaggatgaagctttggagacactcaaatgtttaataacaaatgcc
ctatatgagctacccgagccggctgatagagatccagtcattttagttcttgatgtcaat
gtgcagatgcttccctgggagaatttgcctgtattaaggaatcaagaagtttatcgtatg
ccgtcaatgggttgcatctttttagcgttatctcgaaacaaagatgacagtgccatagcc
cctccttttcctgttatcgatccttccaacacattttatctgttgaatcctagtggtgat
ctgagaagcacacatgaagaattccatgagttattcaggaactatgagtgggagggaatg
gctgggccttgggatggacaaaagaccaaagagctggtcttggccttgacaaatcatgac
cttttcctatactttggacatggaagtggtacacagtacgtttctgggaaagaaatcgag
aagctaaataactgtgcagctgctcttcttatgggatgtagcagtggaacacttcattgc
aaagggagttatgctcctcgaggggcccctttgtcctatttatttgctgggtcccctgct
attattgcaaacctctgggatgtttcagataaggatatcgatcggtttagtaaagctttg
ctcaattcatggttgagagaaaatttcacggatgacaacagttgctccaaatgttctctg
ctaacacaagaattcgaatccttgaatattgcttccaaggataatggtagggcaagaaga
agaggcacgcgagggaagaagccacaacaaataaatgatagtaccaagtgctgcagctgc
aggcagcggcgaatagcttcatatctaagtgaagctaggcgggcttgcaggcttccgttt
ctgattggtgcatctcctgtgtgttacggcgtgcctacaattattaggaagaaagtaatg
actgattctgtgacaggagacgagagatga
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integrated database retrieval system
