Panicum virgatum (switchgrass): 120658160
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Entry
120658160 CDS
T07260
Name
(RefSeq) triosephosphate isomerase, chloroplastic-like isoform X1
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00010
Glycolysis / Gluconeogenesis
pvir00051
Fructose and mannose metabolism
pvir00562
Inositol phosphate metabolism
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
pvir_M00002
Glycolysis, core module involving three-carbon compounds
pvir_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
120658160
00051 Fructose and mannose metabolism
120658160
00562 Inositol phosphate metabolism
120658160
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120658160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120658160
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
120658160
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120658160
Exosomal proteins of bladder cancer cells
120658160
Exosomal proteins of melanoma cells
120658160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
CutC
Motif
Other DBs
NCBI-GeneID:
120658160
NCBI-ProteinID:
XP_039792334
LinkDB
All DBs
Position
2N:complement(54965137..54968983)
Genome browser
AA seq
303 aa
AA seq
DB search
MAAAPGSLACSSRLSRLADLRRTPAAPAAPQQVHLGCSRRRAQRTVAMAGSGKFFVGGNW
KCNGTKDSISKLVSELNAATLETDVDVVVAPPFIYIDQVKNSLTGRIEVSSQNVWIGKGG
AYTGEISAEQLVDIGCQWVILGHSERRNIIGETDEFIGKKAAYALSQNVKVIACIGELLE
EREAGKTFDVCFKQMKAYADSISNWADVVIAYEPVWAIGTGKVATPEQAQEVHAAIRDWL
KTNVSPDVASSIRIIYGGSVNAANCAELAKKEDIDGFLVGGASLKGPDFTTIINSVTSKK
VAA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcgccggggtccctcgcgtgctcctcccgcctctcccgcctcgcggacctc
cgccgcacgccggcggcccctgctgccccgcagcaggtccacctcggctgctcccgccgc
cgcgcgcagcgcaccgtcgccatggctggatccggcaagttctttgtggggggcaactgg
aagtgcaatggaacaaaggactccattagcaagcttgtatctgaattgaatgctgctaca
ctcgaaactgatgtagatgttgtggtggcacctccattcatttatattgaccaggtcaag
aattcactaactggtcgtattgaggtttcttctcagaatgtatggatcggaaaaggagga
gcctacactggagagatcagtgcagaacaattggtggacataggctgtcaatgggtaatt
cttgggcactctgagcgtagaaatattattggtgaaactgatgagtttatcgggaagaag
gctgcatatgcattgagccaaaatgttaaggttattgcctgcataggagagctgttggaa
gagagggaagcagggaaaactttcgatgtatgttttaagcagatgaaggcttatgcagat
agtatttcaaactgggccgatgttgtaattgcatacgagcctgtttgggcaattggaact
ggaaaagttgctactcctgaacaagcccaggaagttcatgctgccatacgcgattggttg
aagaccaatgtatcacctgatgttgcctctagcattcgaataatttatggaggttctgta
aatgctgccaattgtgcggagcttgcaaagaaagaagatattgatggttttcttgttggt
ggtgcctctttgaagggcccggacttcaccaccattatcaactcagtgacttccaagaaa
gttgcagcctga
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