Panicum virgatum (switchgrass): 120658362
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Entry
120658362 CDS
T07260
Name
(RefSeq) tRNA-specific adenosine deaminase TAD1 isoform X1
KO
K15440
tRNA-specific adenosine deaminase 1 [EC:
3.5.4.34
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120658362
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.34 tRNAAla(adenine37) deaminase
120658362
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Deaminases
120658362
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GFIT
Motif
Pfam:
A_deamin
Motif
Other DBs
NCBI-GeneID:
120658362
NCBI-ProteinID:
XP_039792562
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Position
2N:58097607..58100898
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AA seq
392 aa
AA seq
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MTSMLPSSSPAAPREGAVAPSPWAEAASSSALRHYRSLPKKGKPQGRESTVLAAFLLSNP
QDPQNPTVLSMGTGTKCLGASRLSGRGDLVHDAHAEVIARRALIRLLYSEIDRGASPEWL
VASEDGGRWRLRDGHSLHLYITQLPCGVMPVPPSESELREQLDVGVNRCSDISFVQRKPG
RGDTTLSMSCFDKITRWSVVGIQGALLSHILEPLYLTTITIGQLHDGAPEGFTIENNIDK
VLDARLSSLSSRLSAPFKLSKPKIFEAPVPPKEFQQISGDVPPLTCGYSICWNKSGLHEV
ILGTTGRKQGTSSKAACLPSTESLLCKRRLVEAFISLEHPLVTKLQSGELSYRAMKDEAR
ECQHTLELLRKAPFFSCWRAKPASLDSFAVSR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatgctgccctcctcctccccggcggcgccacgtgagggcgccgtcgctccc
tccccctgggcggaggccgcgtcctcttcggcgctccggcactaccgctccctgcccaag
aaagggaagccgcaggggcgcgagtccacggtcctcgccgccttcctcctctctaacccg
caggacccgcagaaccccaccgtcctatccatgggcaccggcaccaagtgcctcggcgcc
tcgcggctcagcggtcgcggagacctcgtccacgatgcgcacgccgaggtcatcgctcgc
cgcgcgctgatccgcctcctttactcggagatcgaccgcggggcctcgccggagtggctg
gttgcttccgaggatggcgggagatggaggctgagggatgggcactcccttcatctttac
atcacccagctcccatgtggggtcatgccagtaccgccatcagaatcagaattgagggaa
cagctggatgttggtgtgaatcgatgcagtgacatcagctttgttcaaaggaagcctggc
cgtggtgatacaacattgtccatgagctgctttgacaaaatcactcgctggagtgttgtt
ggaattcaaggtgcattgctctcgcacatactggaacccttgtatttgaccaccattact
attggacaattacatgatggtgctcctgaaggattcactatcgaaaataatattgataaa
gttctcgatgctcgcttgtcctctctgtccagcagattgtctgctcctttcaaattaagc
aagccaaagatctttgaggcacctgttccacctaaggagtttcaacagatttctggagat
gtgccacctttgacttgcgggtactcaatttgttggaataaatccggcttgcatgaagtt
atccttggaacaactggaaggaaacaaggaacatcttcaaaggcagcatgcttgccctcc
accgagtcattgctctgcaagagaagattggtggaagccttcatatcacttgaacatcca
ttggtaacaaaattgcaatctggggagctgtcttatcgtgccatgaaggatgaggctcgt
gagtgccagcatacgcttgagcttctaagaaaggccccattcttcagctgctggcgcgcc
aagcctgcatcgctggactcgtttgcagtttcaaggtga
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