Panicum virgatum (switchgrass): 120661288
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Entry
120661288 CDS
T07260
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase-like
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00280
Valine, leucine and isoleucine degradation
pvir00650
Butanoate metabolism
pvir00900
Terpenoid backbone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120661288
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120661288
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120661288
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
120661288
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GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
120661288
NCBI-ProteinID:
XP_039796034
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All DBs
Position
2N:53834346..53838192
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AA seq
471 aa
AA seq
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MAGRKDVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCMAFCSEVEDVISMSL
TVVNSLLKKYNVDPKLIGRLEVGSETVIDKSKSIKTWLMQIFEKSGNTDIEGVDSSNACY
GGTAALLNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPISFE
SKYRASHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYRQFCNKYEKIVGKPFSI
SDAEYFVFHSPYNKLVQKSFARLYYNDFMRNCSSIDDDAKEKLQPFSNLTGEESYQSRDL
EKTSQQVAKHLYDIKVQPSTLLPKQIGNMYTASLYAALASVLYNKHDSLDGQRIVMFSYG
SGLTSTMFSLRLNNGQHPFSLSNITSVLGVTEKLQSRHETLPEKFVDTLKLMEHRYGAKD
FETSRDTSLLPPGTFYLTHVDSMYRRFYDQKPAEETTGGKAKCCNGFANGH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcaaggatgtcgggatcctcgccatggacatctacttcccgcccacctgc
gtgcagcaggaggcgcttgaggcccatgacggcgcgagcaaagggaagtacaccatcggt
cttgggcaagattgcatggccttttgcagtgaggtggaggatgtcatctcaatgagtttg
accgttgtcaattccctacttaaaaagtacaatgttgatccaaagcttattggccgtttg
gaggttggaagtgagacggttatagacaaaagtaaatccatcaaaacttggctgatgcaa
atttttgagaaaagtggcaatactgacattgaaggagttgactccagcaatgcttgttac
ggtggaactgctgccctgctgaattgcgtgaattgggttgaaagtaactcctgggacgga
cgctatggtcttgtcgtttgcacagacagtgcggtttatgctgaagggccagctcgtcca
actgggggtgcggctgcaattgcaatgctcattggtcctaatgcacctatttcatttgag
agcaaatatagagcttctcacatggctcatgtttatgatttctacaagcctgatcttgca
agtgaatatccggttgttgatggtaaactatcccaaacatgctacttgatggccctagac
tcatgctacagacaattttgcaacaaatacgagaagattgtggggaaaccattctcgatt
tctgatgcagaatattttgtgttccattctccatacaacaagctcgtgcagaagagtttt
gctcgactttactacaatgacttcatgcgcaactgcagctctattgatgatgatgctaaa
gagaaactccagccattttctaatctgactggtgaagagagctaccagagtcgcgacttg
gaaaagacctcgcaacaagtcgcgaagcacttgtatgacatcaaagttcaaccatcgact
ctgcttcccaaacaaattggcaacatgtatactgcatccctttatgctgcattggcatct
gtactatataacaagcatgatagtctggatggacaaagaatcgtgatgttctcttacggc
agtggcttgacatccactatgttttcgttgaggctaaacaatggccagcatcccttcagt
ttatcaaacattacttcagtgcttggtgtcacagagaagcttcagtcaaggcatgagacc
ttgcccgagaagtttgttgacaccctgaagctgatggagcaccggtacggtgcaaaggat
ttcgagaccagcagggacacgagcctgctgccgcctggcacgttttacctgacccatgtg
gactccatgtaccggaggttctatgaccagaagcctgcagaggaaacgaccggtggcaaa
gccaagtgctgcaacggcttcgcaaatggccactag
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