Panicum virgatum (switchgrass): 120662275
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Entry
120662275 CDS
T07260
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial-like
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00785
Lipoic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120662275
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
120662275
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
120662275
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Mrx7
baeRF_family12
Motif
Other DBs
NCBI-GeneID:
120662275
NCBI-ProteinID:
XP_039797391
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All DBs
Position
2N:complement(70182551..70187274)
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AA seq
1017 aa
AA seq
DB search
MTWFRAASGAARLALRRSLATRAPPAAATTRCGRGFHSTALRPRSAAPAPRAVPLSRLSD
SFLDGTSSVYLEELQRAWEADPSSVDESWDNFFRNFVAQASPSAGVSGQTIQESMQLLLL
VRAYQVNGHMMAKLDPLGLDDRAVPEDLRLGLYGFTDADLDREFFLGVWRMSGFLSENRP
VLTLREILSKLQQAYCGPIGYEYMHIPDRDKCNWLREKIETAKPRDYDKDRRLVMLDRLI
WSTQFENFLATKWATAKRFGLEGGETLIPGMKEMFDRAADLGVENIVIGMPHRGRLNVLG
NVVRKPLSQIFSEFTGGTRPVKGEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANP
SHLEAVDPVVIGKTRAKQFYSNDADRTKNMGILIHGDGSFAGQGVVYETLHLSALPNYTN
GGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDLEAVVCVCELAAEWR
QTFHSDVVVDLICYRRFGHNEIDEPSFTQPKMYQVIKNHPSSLKLYEQKLLGSGEVSKED
VQKIHDKVNRILNEEFTKSKDYVPNKRDWLSAYWTGFKSPEQISRVRNTGVKPEILKRVG
QAITTLPENFKPHRAVKKIFELRAAMIQSGEGIDWAVAEALAFATLIVEGNHVRLSGQDV
ERGTFSHRHAVLHDQETGAKYCPLDHVAMNQSAELFTVSNSSLSEFAVLGFELGYSMENP
NSLVLWEAQFGDFSNGAQVMFDQFLSSGEAKWLRQTGLVVLLPHGYDGQGPEHSSARLER
FLQMSDDNPFVIPEMEPTLRKQIQECNWQVVNVTTPANYFHVLRRQIHREFRKPLIVTAP
KNLLRHKDCKSNLSEFDDVEGHPGFDKQGTRFKRLIKDRNDHKQVEEGINRLILCSGKVY
YELDEERKKSERSDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYSYIS
PRLYTAMKALGRGSFEDIKYIGRAPSAATATGFLSVHVQEQSELVKKALQPEPNKFP
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggttccgcgccgcctcgggcgctgcccgcctcgccctccgccgcagcctcgcc
acccgcgccccgccagccgccgccaccacccgatgcggccgcggcttccactccaccgcc
ctgcggcctcgctccgccgcccccgcgccccgcgccgtcccgctctcccgcctctccgac
agcttcctcgacggcaccagcagcgtctacctcgaggagctccagcgcgcctgggaggcc
gacccctcctccgtcgacgagtcgtgggacaacttcttccgcaacttcgtcgcccaggcc
tccccctccgccggcgtctccggccagaccatccaggagagtatgcagctcctcctcctc
gtcagggcctaccaggtcaacggccacatgatggccaagctcgaccccctcggcctcgac
gacagagccgtccccgaggacctccgcctcggcctctacggcttcactgacgccgacctg
gacagggagttcttcctcggcgtctggaggatgtccggtttcctctccgagaaccgcccc
gtcctcaccctccgcgagatcctcagcaagctccagcaggcctactgcggccccatcggc
tacgagtacatgcacatccccgacagggacaagtgcaactggctcagagaaaagatcgag
accgccaagcccagggactacgacaaggaccgccgcctcgtcatgctcgacaggctcatc
tggagcacgcagttcgagaacttcctcgccaccaagtgggccaccgccaagaggtttggc
cttgagggtggtgagacgctcatccctggcatgaaggagatgttcgatagagctgctgac
ctcggcgtcgagaacattgtcatcggtatgccgcacagggggaggctcaacgtccttggt
aatgttgtccgcaaaccattgtctcagatattcagcgagttcactggtggtacaaggcct
gttaaaggtgaggatgggctctacactggaactggtgatgtcaagtaccacctcggtacc
tcctatgaccgccctactcgtggtggcaagaggattcacttgtccttggtcgccaatccc
agtcatctggaagctgttgatcctgttgttattggcaagacacgtgccaagcaattctac
tctaacgacgccgacaggacaaagaacatgggtattctgatacacggagatggtagcttt
gctggtcagggtgtggtctacgagacactccatctaagtgccctcccgaactacactaat
ggtggaaccatacatattgttgttaacaaccaagttgccttcacgaccgatccaagagct
ggcaggtcctcccagtactgcacagatgttgccaaagccctgaacgctcctatattccat
gtaaatggggacgatttagaggctgtcgtctgtgtatgtgagcttgcagcagagtggcgc
cagacttttcactcagatgtggttgtcgatctaatctgctaccgccgttttgggcataat
gaaatcgatgaaccctccttcacacagccaaagatgtatcaggtcattaagaaccatccc
agctcattgaagctttatgagcagaaactgctaggatcaggagaagtctcgaaagaagat
gtccagaagatccatgacaaggtgaaccgtatcttgaatgaagaatttacaaagagcaaa
gactatgttcccaacaagagggattggctctctgcttactggactggctttaagtcgccc
gagcaaatatcacgtgttcgcaacactggggtcaagccggagatactgaaacgtgttgga
caagcaattactacactgcctgaaaacttcaagccacacagagcagtgaagaagattttt
gagcttcgtgcagctatgattcagagtggcgaaggaattgattgggctgttgcagaagcc
ctagcctttgcaacacttattgtagaaggcaatcatgttaggctaagtggacaggatgtg
gaaagaggaactttcagccaccggcatgcagttctgcatgaccaggaaactggagcgaag
tactgcccacttgaccatgttgcgatgaatcaaagtgcggaactgtttactgtgagtaat
agttcactttcagaatttgctgtccttgggtttgaattgggttactccatggagaaccct
aattcattggttctttgggaagcacaatttggtgacttttccaatggtgcgcaagtgatg
tttgaccagtttttgagcagtggagaggcaaaatggttgcgccaaactggccttgttgtt
ctgcttcctcatggttatgatggccaaggtcccgaacattccagtgcccgtttggagcgc
ttccttcagatgagcgatgataatccttttgtcatacctgagatggaaccgacacttcgc
aaacagatccaagagtgtaactggcaagttgtgaatgtgacaactcctgcaaattatttc
catgtgctgcgtcgtcagatacatagggagttccggaagccactgattgtaacagctcct
aagaacctgcttcggcacaaggattgcaagtccaatctttctgagtttgatgatgttgaa
ggccatccgggatttgataagcagggaacacgtttcaagcgactgataaaggaccgtaac
gatcacaagcaagtcgaggagggtatcaaccgtcttatattatgttctgggaaagtttac
tatgaacttgacgaagagcgtaaaaagtcagagcgcagtgatgttgcaatttgcagagtt
gagcaactttgcccattcccgtacgaccttatccaaagagagcttaagagatatccaaat
gcggagattgtgtggtgccaggaggagcccatgaacatgggtgcatacagctacatctct
cctcggctctatactgccatgaaggctcttgggcggggttcgtttgaagacatcaagtac
ataggcagagcaccttcagctgctacagccacaggcttcctgtcggttcatgtacaggag
cagtcagagctggtaaagaaggcactgcagccggagccgaacaagttcccctga
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