Panicum virgatum (switchgrass): 120664341
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Entry
120664341 CDS
T07260
Name
(RefSeq) probable tRNA N6-adenosine threonylcarbamoyltransferase
KO
K01409
N6-L-threonylcarbamoyladenine synthase [EC:
2.3.1.234
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120664341
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.234 N6-L-threonylcarbamoyladenine synthase
120664341
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
KEOPS/EKC complex
120664341
Prokaryotic type
120664341
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TsaD
HypF_C_2
Motif
Other DBs
NCBI-GeneID:
120664341
NCBI-ProteinID:
XP_039799441
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All DBs
Position
3N:complement(12336238..12340158)
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AA seq
381 aa
AA seq
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MSSAPSPASRRPLGPLALGLESSANKIGIGVVSLSGEILSNPRHTYVTPPGHGFLPRETA
QHHLVHLLPLLRAALADAGVAPADLACVCYTKGPGMGGPLQVAAAAARALSLLWRKPLVA
VNHCVAHIEMGRAVTGAVDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFAR
VLELSNDPNPGYNIEQLAKKGEKFIDLPYVVKGMDVSFSGILSFIEAAAIEKLKNNECTP
ADLCYSLQETVFAMLVEITERAMAHCDSKDVLIVGGVGCNERLQEMMRIMCSERGGRLFA
TDDRYCIDNGAMIAYTGLLAYAHGVTTPLEESTFTQRFRTDEVQAIWREKEMPVLSNIHA
DAMAEVSKDEASMPTPIIVDS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggcgccgtctccggcgagccgccggcccctgggcccgctggcgctggggctg
gagtcctcggccaacaagatcggcatcggcgtggtctccctctctggcgagatcctctcc
aacccgcgccacacctacgtgaccccgccgggccacggcttccttccccgcgagaccgcg
cagcaccacctggtgcacctcctcccgctcctccgcgccgcgctcgccgacgccggcgtc
gcccccgccgacctcgcctgcgtctgctacactaaaggccccggcatgggcggcccgctc
caggtggccgccgcggccgcccgcgcgctctccctcctctggaggaagccgctcgtggcg
gtcaaccactgcgtcgcgcacatcgagatggggcgcgcggtcacgggggccgtggacccc
gtcgtgctctacgtctccggggggaacacgcaggtcatcgcctacagcgaagggaggtac
aggatcttcggagagactatcgatatcgcagttgggaactgcctcgaccgctttgccagg
gtccttgagctctccaatgaccctaacccagggtataacatcgagcagcttgcaaagaag
ggggaaaaattcattgatctcccatatgttgtaaagggtatggatgtgtcatttagtggc
atattgagctttattgaagctgcagcgatcgaaaagcttaaaaataatgagtgcacacca
gcggacctatgctactcactgcaggaaactgtctttgccatgcttgttgaaattactgaa
cgtgccatggcacattgtgattcaaaggacgttcttattgttggtggtgttggttgcaat
gaacgtttacaagagatgatgaggattatgtgctcagaaagagggggtaggctgttcgca
actgatgaccgctattgtatagacaatggggcaatgattgcatacactggtttactggcg
tatgcacatggtgtgaccactcccctggaggagtcaacatttacacaaagattccgaact
gatgaggtccaagcgatttggagggagaaggagatgcctgtgttgagtaatatccatgca
gatgcaatggctgaagtatccaaggatgaagcctctatgccaactccaatcattgtagat
tcctga
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