KEGG   Panicum virgatum (switchgrass): 120664560
Entry
120664560         CDS       T07260                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-2
  KO
K07936  GTP-binding nuclear protein Ran
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03008  Ribosome biogenesis in eukaryotes
pvir03013  Nucleocytoplasmic transport
pvir03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120664560
   03008 Ribosome biogenesis in eukaryotes
    120664560
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120664560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120664560
   03009 Ribosome biogenesis [BR:pvir03009]
    120664560
   03016 Transfer RNA biogenesis [BR:pvir03016]
    120664560
   03036 Chromosome and associated proteins [BR:pvir03036]
    120664560
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120664560
   04031 GTP-binding proteins [BR:pvir04031]
    120664560
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     120664560
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    120664560
  Pre-60S particles
    120664560
Transfer RNA biogenesis [BR:pvir03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    120664560
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     120664560
   Spindle formation proteins
    120664560
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120664560
GTP-binding proteins [BR:pvir04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    120664560
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_22 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 120664560
NCBI-ProteinID: XP_039799758
LinkDB
Position
3N:15102137..15104628
AA seq 221 aa
MALPNQGTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV
EAVALKPPEVTIDLAMQQQHEAELTAAAAQPLPDDDDDLIE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcgctgccgaaccaggggactgtcgattaccccagcttcaagctcgtcatcgttggc
gatggcggaacaggtaaaaccacattcgtgaagaggcatctcactggagagtttgagaaa
aaatatgagccaaccattggtgtggaagttcatccattggattttactactaactgtggt
aagatccgtttctactgctgggatactgctggacaagagaagtttggtggcctcagggat
ggatactatatccatggccagtgtgcgatcattatgtttgatgttacctcaaggctgact
tataagaatgttcctacatggcatagggacttgtgcagggtgtgtgaaaacatccccatt
gtcctgtgtggtaacaaggttgacgtgaagaacaggcaggtgaaggccaagcaggtcacc
ttccacaggaagaagaacctgcagtactatgaaatttctgccaagagcaactacaacttc
gagaagcctttcctttaccttgcaaggaagctggctggggatcccaacattcactttgtt
gaagctgtcgctcttaagcctccggaagttaccattgatttggccatgcagcaacagcat
gaagctgagcttactgctgctgcagcacaacctcttcctgatgacgatgatgatttgatt
gagtag

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