Panicum virgatum (switchgrass): 120665474
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Entry
120665474 CDS
T07260
Name
(RefSeq) transcription factor MYBC1-like
KO
K28173
GARP family transcription factor, LUX subfamily
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120665474
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
120665474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
120665474
NCBI-ProteinID:
XP_039800983
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All DBs
Position
3N:complement(27552508..27555050)
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AA seq
311 aa
AA seq
DB search
MREEEEPSWFARCEEQLPRPDELMPLSQTLITPDLAVAFDIQAHSGGGGTGGGAGGGGAG
GAGGPDMNGGGGGASSAAGSSGGGGGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGI
KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLGGGGGGGGGAGGSHSSGSGTD
AATEHLFATGPVPFLPPGHRAPAAAADPYPPFAPMGAAHHHHHHHAPQIGHFHHPAARPL
GHYGPTGAGFDHGFLSRAVGAGAPPVGPPGMHHHRMMAPASFADDMDLGSRGGPGTGGRR
ELTLFPTSGDH
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggaggaggagcccagctggttcgcgcgctgcgaggagcagctgccgcggccg
gacgagctgatgccgctctcgcagacgctcatcacgcccgatctcgccgtcgccttcgac
atccaggcgcacagcggcggcggcgggacggggggtggcgcggggggaggcggggccggc
ggcgcgggcggcccggacatgaacggcggcggaggcggcgcgtcgtcggccgcgggctcc
agcggcggtggcgggggcggcgccagcgacgagccggcccggacgctcaagcgcccgcgc
ctcgtgtggacgccgcagctgcacaagcgcttcgtcgacgccgtcgcgcacctcggcatc
aagaacgccgtgcccaagaccataatgcagctcatgagcgtcgacggcctcacgcgcgag
aacgtcgcctcccacctccagaagtaccgcctctaccttaagcgcatgcaggggctcggc
gggggcggcggcgggggcgggggcgcgggcggcagccactcctccggctccggcaccgac
gccgccaccgagcacctcttcgccacggggcccgtccccttcctcccgcccggccaccgc
gcgcccgccgccgccgccgacccgtacccgcccttcgcgcccatgggcgccgcgcaccac
caccaccaccaccacgcgccgcagatcggccacttccaccaccccgccgcccggccgctc
ggccactacggccccacgggcgccggcttcgaccacggcttcctcagccgcgcggtcggc
gccggcgcgccgcccgtcggcccgcccgggatgcaccaccaccgcatgatggcgcccgcc
tccttcgccgacgacatggacctcggatcccgaggcggccccggcaccggcggccgccgc
gagctgacgctgttcccgacgtccggggaccactga
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