Panicum virgatum (switchgrass): 120665988
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Entry
120665988 CDS
T07260
Name
(RefSeq) isoflavone reductase homolog
KO
K21568
pinoresinol/lariciresinol reductase [EC:
1.23.1.1
1.23.1.2
1.23.1.3
1.23.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00999
Biosynthesis of various plant secondary metabolites
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00999 Biosynthesis of various plant secondary metabolites
120665988
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.23 Reducing C-O-C group as acceptor
1.23.1 With NADH or NADPH as donor
1.23.1.1 (+)-pinoresinol reductase
120665988
1.23.1.2 (+)-lariciresinol reductase
120665988
1.23.1.3 (-)-pinoresinol reductase
120665988
1.23.1.4 (-)-lariciresinol reductase
120665988
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Gene cluster
GFIT
Motif
Pfam:
NmrA
NAD_binding_10
Epimerase
KR
FlgI
3Beta_HSD
GDP_Man_Dehyd
Sacchrp_dh_NADP
Semialdhyde_dh
Polysacc_synt_2
DUF4350
Motif
Other DBs
NCBI-GeneID:
120665988
NCBI-ProteinID:
XP_039801688
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Position
3N:complement(44743178..44749942)
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AA seq
312 aa
AA seq
DB search
MEKSRVLVVGGTGYIGRRIVRASLAQGHPTLVLMRPEVGLDIDKLQMLLSFKAQGARLVQ
ASLDDHAGLVAAVAQADVVISAMSGAHNRSHNIHLQHKLVEAIKEAGNVKRFIPSEFGMD
PSRMRHALEPGRVTFDDKMEIRRAIEEANIPHTYVSANFFAAYFCPNLCQMRTLVPPKEK
VHVYGDGNVKVIFVDEDDIATYTIKSIDDPRTLNKTIYIRPQENTLTQNEVISKWEKLSG
KVLEKVHIPADEFLASMKGTDLANQVGVTHFYHFFYEGCLTNFEIGEDGAEATLLYPEVW
YTRMDEYMKTDL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagccgcgtgctcgtcgtgggcggcacgggctacatcggccgccggatcgtg
cgggcgagcctggcgcagggtcaccccacgctcgtcctgatgcggccggaggtcggcctc
gacatcgacaaactccagatgctgctgtccttcaaggcccagggcgcgcgcctcgtgcag
gcgtcgctggacgaccacgccgggctcgtcgccgccgtggcgcaggccgacgtggtgatc
tcggccatgtccggggcgcacaaccggagccataacatacacttgcagcacaagctcgtc
gaggctatcaaggaggccggtaacgtcaagcgtttcataccatcggaatttggcatggac
ccatcgaggatgaggcatgctcttgaaccaggaagggttacatttgatgataagatggag
ataagaagagcaatagaagaggcgaacattccccacacctatgtttctgctaatttcttt
gctgcttacttttgtcctaacctctgtcaaatgcgcacccttgttccacccaaagagaaa
gttcatgtatacggagacggcaacgtcaaagtgatatttgtggatgaagatgatatcgca
acatatacaattaagtccattgatgatccccgcaccttgaacaagacaatatacataaga
ccgcaagaaaataccctcactcaaaatgaagtgatttcgaaatgggaaaagctctctgga
aaagttctagagaaagttcatattcctgcagatgaattcttggcttccatgaaaggtact
gaccttgccaatcaagtcggagtgacccacttctaccactttttctacgaaggttgcttg
acaaactttgaaatcggggaggatggagcagaggctactctgctgtacccagaggtttgg
tacacccgcatggacgagtacatgaagacagatttgtaa
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