Panicum virgatum (switchgrass): 120669429
Help
Entry
120669429 CDS
T07260
Name
(RefSeq) homogentisate geranylgeranyltransferase, chloroplastic-like
KO
K09833
homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:
2.5.1.115
2.5.1.116
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00130
Ubiquinone and other terpenoid-quinone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
120669429
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvir01006
]
120669429
Enzymes [BR:
pvir01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.115 homogentisate phytyltransferase
120669429
2.5.1.116 homogentisate geranylgeranyltransferase
120669429
Prenyltransferases [BR:
pvir01006
]
Compound prenylation
HGA prenyltransferase
120669429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
DUF5373
Motif
Other DBs
NCBI-GeneID:
120669429
NCBI-ProteinID:
XP_039805121
LinkDB
All DBs
Position
4N:complement(43270305..43273093)
Genome browser
AA seq
283 aa
AA seq
DB search
MYQILGITSVSLLPMKSLDDLSVTVLWGFLEALASSLCMNIYVVGLNQLFDIEIDKVNKP
TLPLASGEFSMRTGVSLVVAFLVMSISIGIRSKSAPLMCALLVSFLLGSAYSIDVPLLRW
KRHPFLAASCILVVRAILVQLAFFTHMQQHILKRPFAPTRSVVFATLFMCCFSAVIALFK
DIPDVDGDRDFGIQSLSVRLGQQKVYRLCINMLMTAYTAAILVGASSPNLYQKIATVFGH
GLLAFVLWQRARQFDITNKTCITPFYMFIWKLFYAEYFLIPFM
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagatactaggcattacttcagtgtccctcctaccaatgaagagcctagatgat
ttaagtgtgacagttctatggggatttcttgaggctttagcctcctctttatgcatgaac
atttatgtagtggggctgaatcagttgtttgacattgaaattgacaaggtcaacaagcca
actctcccattggcttctggagagttttcaatgagaactggggtatcattagttgtggca
ttcttggtcatgagcattagcattggaataagatccaaatctgctccattgatgtgtgcc
ttgcttgtcagcttccttcttggaagtgcctactctatagatgttccattgctcaggtgg
aagcgacatccctttctcgctgcatcctgcatacttgttgtgagggctatattggttcaa
ttagctttctttacacacatgcagcaacatattctgaagaggcccttcgcgccaacaagg
tcggtggtgtttgcaacattgtttatgtgttgcttctctgcagtaatagctttattcaag
gatatccctgatgttgatggagatagagatttcggcattcaatctttgagtgtacggtta
ggtcaacagaaagtgtataggctctgcattaatatgctcatgacagcatatacagctgca
attttggtaggagcatcatctccaaatctgtatcaaaagattgccactgtgtttggtcat
ggcttgctcgcttttgtgctttggcagagagcacgacaatttgacatcacaaataagaca
tgcatcacgccattttacatgttcatttggaagttattctacgccgagtatttcctcata
ccatttatgtag
DBGET
integrated database retrieval system
