Panicum virgatum (switchgrass): 120670605
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Entry
120670605 CDS
T07260
Name
(RefSeq) cystathionine beta-lyase, chloroplastic-like
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir00450
Selenocompound metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120670605
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
120670605
Enzymes [BR:
pvir01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
120670605
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
GDC-P
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
120670605
NCBI-ProteinID:
XP_039806683
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Position
4N:5690936..5694552
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AA seq
471 aa
AA seq
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MAAAAAAPTAAARLILLSTPPANPSISASAQAQALSAPSPRLAPSRRMAGGPPAAIAGAS
GGSERDLSASALSMESQESVFASDSGLEAKEPSVATILTSFENSFDMYGALSTPLYQTAT
FKQPSATDYGTYDYTRSGNPTRDVLQSLMAKLEKADQAFCFTSGMAALAAVTHLIQSRQE
IVAGEDIYGGSDRLLSQVVPRHGIVVKRVDTTKISDVASAIGPLTKLVWLESPTNPRQQI
TDIKKISEIAHSRGALVLVDNSIMSPVLCRPIELGADIVMHSATKFIAGHSDLMAGILAV
KGESLAKEIAFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQANAQKIALFLASHPRVK
QVNYAGLPDHPGGSLHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFNVTVSFGSVKSLI
SLPCFMSHAAIPAAVREQRGLTDDLVRISVGIEDVNDLVADLDRALRTGPA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgccgccgcccccacagccgccgcccgcctcatcctcctgtccactccg
cccgcgaaccctagcatctccgcctcggcccaggcccaggccctcagcgccccgtcccca
cgcctcgcgccctcccgccgcatggccgggggcccgccggcggcgatcgcgggcgcctcc
ggcggctccgagcgggacctgagcgcgtcggcgttgtccatggagtcccaggagtccgta
ttcgcctcggattccggtttggaggcgaaggagccgagcgtggcgacgatcctgacgagt
ttcgagaactctttcgacatgtacggggcgctcagcacgcctctgtaccaaacggccacc
tttaagcagccttcagcaacagattatggaacttatgattatactaggagtggtaaccct
actcgtgatgttctccagagccttatggctaagcttgagaaggcagatcaagcgttctgc
ttcaccagtggaatggcagcactagctgcagtaacgcacctcattcagtccagacaagaa
attgttgctggagaggacatatatggtggatctgatcgtctgctttcgcaagttgtgcca
agacatggaatagttgtaaagcgagtggacacaaccaaaattagtgatgtggcctctgca
attggtcccttgactaaactagtttggcttgaaagtcccaccaatcctcgtcaacagatt
actgacataaagaaaatatcggaaatagctcattcacgtggtgctcttgttttggtagac
aacagtatcatgtctccagtgctctgccgccctatagaacttggagcagatattgtcatg
cactcagctaccaaatttatagctggacatagtgatcttatggctggaattcttgcagta
aagggcgaaagcttggctaaagaaattgcatttctgcaaaatgctgaaggatctggtttg
gcgccttttgactgctggctttgcttgaggggaatcaaaaccatggccttgcgggtggag
aaacaacaggctaatgcccagaagattgctttattcctagcatctcacccaagggtcaag
caagtgaactatgccgggcttcctgaccatcctggggggtctttacactattctcaggca
aagggagcgggctctgttctcagtttcctcaccggctcactggcgctctcaaagcacgtt
gtcgagactaccaagtacttcaatgtgacagtcagcttcgggagcgtgaagtcgctcatc
agcctgccgtgcttcatgtcgcacgcggccatccccgccgccgtccgcgagcagcgcggt
ctgactgacgacctcgtccggatctccgttggcatcgaggacgtcaacgacctcgtggcc
gacctcgaccgtgcgctcagaaccggcccggcgtag
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