KEGG T07260: 120670931

Panicum virgatum (switchgrass): 120670931

Entry

120670931         CDS       T07260

Name

(RefSeq) homogentisate geranylgeranyltransferase, chloroplastic-like

K09833

homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:2.5.1.115 2.5.1.116]

Organism

pvir Panicum virgatum (switchgrass)

Pathway

pvir00130

Ubiquinone and other terpenoid-quinone biosynthesis

pvir01100

Metabolic pathways

pvir01110

Biosynthesis of secondary metabolites

pvir01240

Biosynthesis of cofactors

Module

pvir_M00112

Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol

Brite

KEGG Orthology (KO) [BR:pvir00001]
09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    120670931
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:pvir01006]
    120670931
Enzymes [BR:pvir01000]
2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.115  homogentisate phytyltransferase
     120670931
    2.5.1.116  homogentisate geranylgeranyltransferase
     120670931
Prenyltransferases [BR:pvir01006]
Compound prenylation
  HGA prenyltransferase
   120670931

SSDB

Motif

Pfam:

UbiA DUF5373

Other DBs

NCBI-GeneID:

120670931

NCBI-ProteinID:

XP_039807061

LinkDB

Position

4N:complement(43204734..43207032)

AA seq 339 aa
MRPTGTQCRHSSVLKLRCNAATHPQHNFNIDQFEEIGIEVTKKVRAFYWFCRPHTIIGTI
LGITSVSLLPMKSIDDLSVTVLWGFLEALASSLCMNIYVVGLNQLFDIEIDKVNKPTLPL
ASGEFSMRTGVSLVVAFLVMSISIGIRSKSAPLMCALLVSFLLGSAYSIDVPLLRWKRHP
FLAASCILVVRAILVQLAFFTHMQQHILKRPFAPTRSVVFATLFMCCFSAVIALFKDIPD
VDGDRDFGIQSLSVRLGQQKVYRLCINMLMTAYTAAILVGASSPNLYQKIATVFGHGLLA
FVLWQRARQFDITNKTCITPFYMFIWKLFYAEYFLIPFI

NT seq 1020 nt +upstreamnt +downstreamnt
atgagaccgacagggacacaatgcagacattcttcagtcctcaaactcagatgcaatgca
gctactcatcctcaacataatttcaatatcgatcaatttgaggaaattggcatagaagtc
acgaagaaagtgagagctttctattggttttgtcggccccacacaatcattggcactata
ctaggcattacttcagtgtccctcctaccaatgaagagcatagatgatttaagtgtgaca
gttctatggggatttcttgaggctttagcctcctctttatgcatgaacatttatgtagtg
gggctgaatcagttgtttgacattgaaattgacaaggtcaacaagccaactctcccattg
gcttctggagagttttcaatgagaactggagtatcattagttgtggcattcttggtcatg
agcattagcattggaataagatccaaatctgctccattgatgtgtgccttgcttgtcagc
ttccttcttggaagtgcctactctatagatgttccattgctcaggtggaagcgacatccc
tttctcgctgcatcctgcatacttgttgtgagggctatattggttcaattagctttcttt
acacacatgcagcaacatattctgaagaggcccttcgcgccaacaaggtcggtggtgttt
gcaacattgtttatgtgttgcttctctgcagtaatagctttattcaaggatatccctgat
gttgatggagatagagatttcggcattcaatctttgagtgtacggttaggtcaacagaaa
gtgtataggctctgcattaatatgctcatgacagcatatacagctgcaattttggtagga
gcatcatctccaaatctgtatcaaaagattgccactgtgtttggtcatggcttgctcgct
tttgtgctttggcagagagcacgacaatttgacatcacaaataagacatgcatcacgcca
ttttacatgttcatttggaagttattctacgccgagtatttcctcataccatttatttag

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