Panicum virgatum (switchgrass): 120671280
Help
Entry
120671280 CDS
T07260
Name
(RefSeq) probable sucrose-phosphate synthase 3 isoform X1
KO
K00696
sucrose-phosphate synthase [EC:
2.4.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120671280
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.14 sucrose-phosphate synthase
120671280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
S6PP
GT-B_Sucrose_synth
Glyco_trans_1_4
Glyco_trans_4_4
Glyco_transf_4
GATA_AreA
Motif
Other DBs
NCBI-GeneID:
120671280
NCBI-ProteinID:
XP_039807507
LinkDB
All DBs
Position
4N:complement(42758186..42766199)
Genome browser
AA seq
982 aa
AA seq
DB search
MYGNDNWINSYLDAILDAGKGAAGAGAGAGAARGRGGGGGGWFGDRPSLLLRERGHFSPA
RYFVEEVITGYDETDLYKTWLRANAMRSPQEKNTRLENMTWRIWNLARKKKEFEKEEASR
LSKRRLETEKQRNDATADMSEDLFEGVKGEDAGDPSVAYGDSTTGNTPKISSFDKLYIVL
ISLHGLIRGENMELGRDSDTGGQVKYVVELAKALSSSPGVYRVDLLTRQILAPNFDRGYS
EPDEMLASTSFKNLKFERGENSGAHIIRIPFGPKDKHLAKENIWPFIQEFVDGALGHVVR
MSKTIGEEIGSGCPVWPAVIHGHYASAGVAATLLSGALNVPMVFTGHFLGKDKLEGLLKQ
GRQTREQINMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVMLARKLRAL
VKRGANCFGRYMPRMVIIPPGVEFGHIIHDFDLYGDEDSPSPASEDPSIWFEIMRFFTNP
RKPMILAIARPYAEKNITTLVKAFGECHPLRELANLTLIMGNREAISKMNKVSAAVLTSV
LTLIDEYDLYGQVAYPKHHKHSEVPDIYRLAARTKGAFVNVAYFEQFGVTLIEAAMHGLP
VIATKNGAPVEIHQVLDNGLLVDPHDQHSIADALYKMLSEKQFWSRCRENGLKNIHQFSW
PEYCKNYLSRILTLGPRHPAFGNKEDQKARVNSRRHIIVIAVDSVSKEDLIQIIRNSIEA
TRTGTLSGSTGFVLSTSLTIAEIRSLIKYTGMLPTDFDAFICNCGSDIYYPSRSSDVPNN
SLVTFALDNNYRSHIEYRWGGEGLRKYLVKWASSVVERRGRTEKQVIFEDSEHSSTYCLA
FRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPIHASRSQALRYLSIRWGME
LPDAIVIVGESGDSDYEELFGGLHKTIILKGGFNTPANRIHTVRRYPLQDVVALDSSNII
EIEGFSSVDIRSAMQQLGIPTQ
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaacgacaactggatcaacagctacctcgacgccatcctcgatgccggcaag
ggcgccgcgggcgcgggcgcgggcgccggcgccgccaggggccggggcggcggcggcggc
ggctggttcggggaccggccctcgctgctcctccgcgagcgtggccacttctcccccgcc
cgctacttcgtcgaggaggtcatcaccgggtacgacgagacggacctctacaagacctgg
ctccgggcgaacgcgatgcggagcccgcaggagaagaacacgcgcctggagaacatgacc
tggaggatctggaacctcgccaggaagaagaaggagtttgagaaagaggaagccagtcgc
ttgtcaaaacgccgtctagagactgagaagcaacgaaatgatgctactgcagatatgtct
gaagatctttttgaaggagtgaagggagaggatgctggtgatccttctgttgcctatggt
gatagcacaactgggaacacacctaagattagttcatttgacaagctatacatagtgctg
atcagccttcatggcctgattcgtggagagaatatggagcttggccgtgattcagatact
ggtggccaggtcaaatacgttgtggaacttgctaaagcattaagttcatctcctggagtt
taccgggttgatctgttgacaagacaaatcttagccccaaatttcgatcgtggctacagt
gagccagatgagatgctggcttcgacaagcttcaagaacttaaaatttgaaagaggagag
aacagtggtgcacatatcatcagaataccatttggccccaaagacaagcatctagctaaa
gaaaatatctggcctttcattcaagaatttgttgatggtgcactgggtcatgtagtgcgg
atgtcaaaaacaataggcgaggaaattggcagtgggtgtcctgtttggcctgctgtgatc
catggtcattatgccagtgcaggagttgctgctactctactatctggagcacttaatgtt
cctatggtgtttacagggcattttcttgggaaagataagttggaagggcttctcaagcaa
gggagacaaacaagggaacaaataaacatgacatataaaataatgcgccgaattgaggca
gaggagctgtctctcgatgcttccgaaatagttatcgcaagcacaaggcaagagatagaa
gagcagtggaacttgtatgacggttttgaggtcatgcttgcaaggaagctccgtgcacta
gtcaagcgcggcgctaactgttttggtcgctacatgcctcgtatggttataattcctcca
ggtgttgaattcggccacataattcatgattttgatttgtacggagatgaagatagccca
tctccagcctctgaggatccatctatttggtttgagataatgcgattcttcacaaatcct
aggaaacctatgattctggctattgcccgtccatatgctgaaaagaatattacaacgctt
gtgaaggcatttggtgaatgccatccattgagggagcttgctaaccttacattgataatg
ggtaaccgtgaggcaatttccaaaatgaataaagtcagtgcagctgttttgacatcggtg
cttacattgattgatgaatatgatttatatggtcaagtggcatacccaaagcatcacaag
cactcggaagttcctgatatttatcgtttagcagcaagaacaaagggcgcttttgtaaat
gttgcttactttgagcaatttggtgtcacattgatagaggctgccatgcatgggttgcct
gtaattgcaacaaaaaatggggctcctgttgaaatccatcaggttctggacaatggtctt
ctcgttgatccccatgatcagcattcaatcgcagatgccctctataagatgctttctgaa
aagcagttttggtcaagatgtcgagagaatggtctgaaaaatatacaccaattttcttgg
cctgaatattgcaaaaattacttgtcaaggatattaactcttggcccaaggcatcctgct
tttgggaacaaagaagaccagaaggcacgtgtgaacagcaggaggcatatcattgttatt
gctgtggactctgttagcaaggaagatttaattcaaattatcagaaattctatcgaggct
actcgcaccggaactttgtcgggttcgacaggtttcgtgctgtcaacttcattgacaata
gcagagatacgttcgctaataaaatacacaggcatgctccctacagattttgatgccttc
atatgcaactgtgggagtgatatatattatccttcacggtctagtgatgtgccaaataat
tctcttgttacatttgcattggacaataattaccgatcacatatcgagtatcgttgggga
ggggagggtttaaggaagtacttggttaagtgggcttcttcagtagtagagagaagggga
agaactgaaaaacaagtcatctttgaagattcggaacactcttcaacatactgtctagca
tttagagtggttaatccaaatcatttgcctcctttgaaagagctgcaaaagttgatgaga
atacagtcactacgttgtcatgctctgtataaccatggtgctaccaggctatccgtaatt
ccaattcatgcatcacgatctcaggctctaaggtatttgtctattcgctggggcatggag
ttgccagatgctattgttatcgttggcgaatccggtgattctgattatgaagaactgttt
ggaggtcttcataagacaatcatccttaagggtggattcaatactcctgcaaataggatc
catacagtcagaagataccctttacaggacgttgttgctcttgatagctcaaatatcatt
gaaattgagggtttcagcagtgttgacatcaggtctgcaatgcaacagcttggtataccc
acacaatga
DBGET
integrated database retrieval system
