Panicum virgatum (switchgrass): 120671449
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Entry
120671449 CDS
T07260
Name
(RefSeq) homogentisate 1,2-dioxygenase
KO
K00451
homogentisate 1,2-dioxygenase [EC:
1.13.11.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00350
Tyrosine metabolism
pvir01100
Metabolic pathways
Module
pvir_M00044
Tyrosine degradation, tyrosine => homogentisate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
120671449
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.5 homogentisate 1,2-dioxygenase
120671449
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GFIT
Motif
Pfam:
HgmA_N
HgmA_C
Motif
Other DBs
NCBI-GeneID:
120671449
NCBI-ProteinID:
XP_039807717
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Position
4N:complement(214841..217553)
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AA seq
454 aa
AA seq
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MAAQEEEQLRYLSGLGNTFSSEAVPGSLPVGQNSPLVCPRGLYAEQLSGTSFTTPRAQNL
RTWLYRIKPSVTHEPFHPRPTAHGRLVGEFDRSTAAATPTQLRWRPPEVPLDPPLDFIDG
LYTVCGAGSSFLRHGYAIHMYAANKSMDGCAFCNADGDFLIVPQQGRLLITTECGKVLVS
PGEIVVIPQGFRFAIDLPDGPSRGYASEIFGTHFQLPDLGPIGANGLASPRDFLSPTAWF
EQVHRPGYTIVHKYGGELFTATQDFSPFNVVAWHGNYVPYKYDLSRFCPFNTVLFDHGDP
SVNTVLTAPTDKPGVALLDFVIFPPRWLVAENTFRPPYYHRNCMSEFMGLIYGIYEAKAD
GFLPGGASLHSCMTPHGPDTKTYEATISRADANEPFRLSGTLAFMFESSLIPRVCRWALD
SPYRDLDYYQCWIGLKSHFSHDSGATASEPAASP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggaggaggagcagctgcgctacctctccggactgggcaacaccttctcg
tcggaggcggtgccggggtcgctccccgtcggccagaacagcccgctggtgtgcccgcgg
ggcctctacgccgagcagctctccggcacctccttcaccaccccacgggcccagaacctg
cgcacgtggctgtaccggatcaagccatcggtgacccacgagcccttccacccccgccca
accgcccacggccgcctcgtcggggagttcgaccgctccacagccgccgccacgcccacg
cagctgcgctggaggccgcccgaggtgcccctggacccgcccctcgacttcatcgacggc
ctctacaccgtctgcggcgccgggagctccttcctccgacatggatacgccatccacatg
tacgctgctaacaagtccatggacggatgcgccttctgcaatgcggatggtgatttcctc
attgttccccagcaaggaaggttgttgatcacaaccgaatgtggaaaggtgctagtttca
cctggcgaaattgttgtgattcctcaaggcttccgctttgccattgacttgcctgatggc
ccctcacgtggctacgcttctgagattttcggcacccactttcagctccctgatcttggc
ccaatcggtgccaatggtttggcttcaccaagggatttcctttcccccacagcatggttt
gagcaggtccaccgccctgggtacacaatagtgcacaagtacggtggtgaactattcact
gccacgcaggatttttctccgttcaatgtggttgcatggcatgggaattatgtcccatat
aagtatgatttgagtaggttctgcccatttaatacggtcctatttgatcatggtgaccct
tcagtaaacacagtccttactgcgccaactgataagcctggtgtcgcattacttgatttt
gtaatattcccacctaggtggttggttgctgaaaatacattccgccctccatactaccat
cgcaactgcatgagtgagttcatgggcctgatttatgggatatacgaggctaaggctgat
ggttttctccccggaggtgctagcctgcacagctgcatgacaccacatggaccagacacc
aagacatacgaggcaacgatcagccgtgctgatgccaatgagccattcaggctcagtggt
acgctggcgttcatgttcgagtcttcgctcatccctcgtgtgtgccggtgggctcttgat
tcgccgtatcgagatcttgattactaccaatgttggattggattgaagtcccacttctca
catgacagtggagccacagccagcgagcctgctgcaagtccatag
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