Panicum virgatum (switchgrass): 120671478
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Entry
120671478 CDS
T07260
Name
(RefSeq) probable homogentisate phytyltransferase 1, chloroplastic
KO
K09833
homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:
2.5.1.115
2.5.1.116
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00130
Ubiquinone and other terpenoid-quinone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
120671478
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvir01006
]
120671478
Enzymes [BR:
pvir01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.115 homogentisate phytyltransferase
120671478
2.5.1.116 homogentisate geranylgeranyltransferase
120671478
Prenyltransferases [BR:
pvir01006
]
Compound prenylation
HGA prenyltransferase
120671478
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Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
120671478
NCBI-ProteinID:
XP_039807744
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Position
4N:44485252..44490511
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AA seq
399 aa
AA seq
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MDALRLRPSLLSARPGAARPRDHFLPPFCSIQRNGEPRVCFSAQRTQGPSLYHCQKSFDW
KSTYSRISRQSTSTSINASGQPLQSEPEAHDSASIWRAISSSLDVFYRFSRPHTVIGTAL
SIVSVSLLAVQSLSDISPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLA
SGEYTPTTGIAIVSVFAAMSFGLGWAVGSQPLFWALFISFVLGTAYSINLPYLRWKRSAV
VAALCILAVRAVIVQLAFFLHIQTFVFRRPAVFTRPLMFATGFMTFFSVVIALFKDIPDI
EGDRIFGIRSFSVRLGQKKVFWICVGLLEMAYGVAILMGATSTSLWSKTATIAGHSILAA
ILWSCARSVDLTSKAAITSFYMFIWKLFYAEYLLIPLVR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgctccgcctccggccgtccctcctctccgcgcggcccggcgccgcccgcccg
cgagatcattttttaccaccattttgttcaattcagcgaaatggggaaccgcgagtgtgt
ttttccgcccaaaggacccaaggcccttccttgtatcactgtcagaaatccttcgattgg
aaatccacctattctaggatatcacgtcagtcaacaagtacttctattaatgcttcgggc
caaccgctgcaatctgaacctgaagcacatgattctgcaagcatctggagggcaatatca
tcttcattagatgtgttttacagattttcccggccacatactgtcatcggaacagcgtta
agcatagtctcagtttcccttctagctgtccagagcttgtctgatatatctcctttgttc
ctcactggtttgctggaggcagtggtagcagctcttttcatgaacatttatattgttgga
ctgaaccagttattcgacattgagatagacaaggtcaacaagccaactcttccactggca
tctggggaatatacccctacaactgggattgcaatagtatcggtctttgctgctatgagc
tttggccttggatgggctgttggatcacaacctctgttttgggctcttttcataagcttc
gttcttggaactgcatactcaatcaatttgccatacttaagatggaagagatctgctgtt
gttgcagcactctgcatattagcagttcgtgcagtgattgttcagctggccttttttctc
cacattcagacctttgttttcagaagaccagcagtttttacgaggccattgatgtttgca
actggatttatgacgttcttctcagttgtaatagcacttttcaaggatatacctgatatt
gaaggggaccgcatatttgggattcgatcattcagtgttcgtttgggccaaaagaaggtc
ttctggatctgtgttggcctgcttgagatggcttacggcgttgcaatactgatgggagca
acttctacctctctgtggagcaaaaccgcaacaattgccgggcattccatcctcgcggcg
atcctatggagctgcgcgcggtcggtcgacctgacgagcaaggccgcgataacatccttc
tacatgttcatctggaagctgttctacgcggagtacctgctcatccccctggtgcggtga
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