Panicum virgatum (switchgrass): 120672124
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Entry
120672124 CDS
T07260
Name
(RefSeq) LOW QUALITY PROTEIN: probable glutamate carboxypeptidase LAMP1
KO
K01301
N-acetylated-alpha-linked acidic dipeptidase [EC:
3.4.17.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120672124
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.21 glutamate carboxypeptidase II
120672124
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
120672124
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Motif
Pfam:
TFR_dimer
Peptidase_M28
PA
Peptidase_M20
Motif
Other DBs
NCBI-GeneID:
120672124
NCBI-ProteinID:
XP_039808355
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Position
5N:56379746..56385082
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AA seq
726 aa
AA seq
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MPPLNGTDEPSVRGPLLPPPAPRRAAARLHTLPLIVAAAFVASFHLLFLTPGPSYYQSLF
LSLGSNDTAAAQLRALTQRPHVAGTRANSLTAAYVRDALSSHSFPTRLTPYSVLLSYPAR
RSLSLSAPDRGTIHFALEQETYPGDPYAAVSAEAVPTFLAYAASGSVTAEAVYANYGRAE
DFAYLAARSVNVTGKVAVARYGKVFRGDIVRNARDAGAAAAVIYTDAKDYAAGKAFPDGP
WMPPTGVQVGSTFKGVGDPTTPMWASRNSEGCQRLSIAEAMASDDMPGIPALPVSGMDGE
AILRLIGGDVAPEDWQGGAAAPAYRLGPGPAVLNLTYVGNETMATIQNVISVIEGKEEPE
RYVILGNHRDAWTFGGVDPNSGTAALLELAQRLSKLQKKGWRPRRTIILCNWDAEEYALI
GSTEWVEENRAMITSRTVAYLNVDSAVYGRGFSASATPQLDELLKEASKQVQNPDNRTES
LYDLWIASNTSPLIGRLGGGGSDYSAFVQHIGIPSADMSIGSDYAVYHSLYDDFIWMEKF
GDPLFQRHVAAASIWGLVALRLSDDEILPFNYSYYAAELENGAMGINERVIGMPVSLSPL
HKSIKEFRSAVLKVDSELKALQTWKIWAPWRSCPLKIRDINDRLMMTERAFTEREGLSGR
PWYKHLIYGPSLHNDYGAEIYPGIDDAIQTAKRTNTSESWQAVQNEIHRVARVINQAALV
LTGGLT
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctgaacgggaccgacgagccctcggtgcggggcccgctcctcccgccccca
gctccgcgccgcgcggccgcgaggctccacacgctcccgctcatcgtcgcggccgccttc
gtcgcctcgttccacctgctcttcctcacgccgggcccctcctattaccagtccctcttc
ctctcgctcggctccaacgacaccgccgcggcgcaactccgcgcgctcacccagcgcccg
cacgtcgccggcacccgggccaactccctcaccgccgcctacgtgcgcgacgcactctcc
tcccactccttccctacccgcctcactccctactccgtcctcctctcctaccccgcgcgc
cgctcgctctccctctccgcgccggaccgcggcaccattcacttcgctctggagcaggaa
acctaccccggggacccctacgccgcggtctccgcggaggccgtccccaccttccttgcc
tacgcggcctccggctcggtcacggccgaggccgtctacgccaactacggccgggcggag
gacttcgcctacctcgccgcccgcagcgtcaacgtcaccgggaaggtcgccgtcgcgcgc
tacggcaaggtgttccgcggtgacatcgtccggaacgcgcgcgacgccggcgcggccgca
gcggtgatatacaccgacgccaaggactacgcggcggggaaggccttcccggacgggccg
tggatgccgccgaccggcgtgcaggtgggtagcacgttcaagggggtcggggaccccaca
acgccgatgtgggcgtcgcggaactcggaagggtgccagcgcttaagcatcgcggaggcg
atggcctccgacgacatgccggggataccagcgctgccggtgtcgggaatggacggggag
gccatactacggctcattggcggcgatgtggcgcccgaggattggcaaggaggcgccgca
gcgccggcttaccggcttgggcccggaccagcagtgctcaacctgacctacgtagggaat
gagacaatggctacaattcagaatgttatttcggtgattgaagggaaagaagaacctgaa
cggtatgtaatccttgggaatcatcgtgatgcatggacatttgggggagttgatccaaat
agtgggacagcagccttgcttgagctagctcaacggttgtctaagcttcaaaagaagggc
tggaggcctcggcgaaccatcatcttgtgcaactgggatgccgaagagtatgcattgata
ggatccaccgaatgggttgaggagaacagagcaatgataacttcaaggactgttgcttac
ctgaatgttgattctgcggtgtatggtcgtggattttccgcatcagcaactcctcaactt
gatgaattgcttaaagaagctagtaaacaggtacaaaatccggataacagaactgagagt
ctgtatgacttgtggatagcttctaacacctctcccttgatcggaagattaggtggtgga
gggtccgattattctgcatttgttcaacacattggtattccctcagcagacatgtctatt
gggtcagactatgcagtctaccatagtttgtacgatgacttcatatggatggagaagttt
ggagatcccttgttccagaggcatgtcgcagcggcaagcatatgggggcttgttgctctg
cggctgtcagatgacgagatcctacccttcaactacagctattatgccgcagagcttgag
aatggagcaatgggtataaatgagagagtaattggaatgcctgtcagtttatctcccctg
cacaagtcaatcaaagaattcagaagtgcagttctgaaagtggattctgaattgaaggct
ctacagacatggaaaatttgggcaccatggagaagctgtccattgaagatcagagacatc
aacgaccggttgatgatgactgaaagggcattcacggagcgtgaagggttgtctggaaga
ccatggtacaaacacctgatttacgggccttcactgcacaacgattatggggctgaaata
tatccaggtattgatgatgccatccagacagcaaagagaacaaatacatcagaatcctgg
caggctgtacagaatgagattcacagggttgctagagtcataaatcaggcagcattagtt
ctaactggagggctaacgtga
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