Panicum virgatum (switchgrass): 120672309
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Entry
120672309 CDS
T07260
Name
(RefSeq) alpha-mannosidase I MNS4-like isoform X1
KO
K10085
ER degradation enhancer, mannosidase alpha-like 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120672309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pvir04091
]
120672309
Lectins [BR:
pvir04091
]
M-type lectins
120672309
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_47
Motif
Other DBs
NCBI-GeneID:
120672309
NCBI-ProteinID:
XP_039808568
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Position
5N:59008432..59032051
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AA seq
672 aa
AA seq
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MQPMRRRQRGFPLLCLSVALLAAAALLPGAAVAEGVTPSEARRLRDEVKDMFYHAFDGYM
KYAFPLDELRPLSCQGEDSLGGYALTLIDSLDTLALLGDKEKFGAAVEWVGKNVRFDINK
TVSVFETNIRILGGLLSAHLIASDYATGMRIQSYDDQLLHLAADLAQRLLPAFDTPTGIP
FGSINLKYGVDENESKITSTAAGGTLTLEFGILSRLTNNTVFEQVTKNSVRGIWSRRSKL
NLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQEAYKAAMHYLH
HDPWYVEVNMNSGATVWPLFNSLQAFWPGLQVLAGDVDPAIRTHDAFFSVWKKYGFTPEG
FNLATSTVQNGQRSYPLRPELIESTYWLFKATRDYRYIDVGRDILASLQYGARCPCGYCH
ISDVETHKQDDHMESFFLAETVKYLWLLFDLAAGPDNIVENGPYKYIFSTEGHLLPVTPE
IALVDEHCSYFGAFCNGSAARGYGTSASSTKYQKANYTQLDDIQTPSSHHPASNIFATRG
YIKGVCPGLTHAQKLGISYSDEEGNVIEQTSESHEHHGESAVESSVQVQSSNIILISHPV
ASQQDQAFGRWSGTGDHADIVVTADSDSVSHDNTDGSLGVNTEELTKDTERSSKQSADED
VAQNLMSNEDIS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgatgcggcggcggcagcgaggcttcccgctgctctgcctctcggtcgccctc
ctcgctgccgccgctcttctccccggcgctgccgtcgccgagggcgtcactccctccgag
gcgcgtcggctccgcgacgaggtgaaagatatgttctatcatgcatttgatgggtacatg
aagtatgctttcccactcgatgaactgcgacccttaagttgccaaggtgaagactccctt
ggtggttatgcacttactctaatcgactctttggataccttggctttactgggtgataag
gagaaatttggtgctgctgtggagtgggttggtaagaatgtccgctttgatattaataaa
accgtctctgtttttgaaaccaacatacgtatccttgggggtctgttatcagctcacctg
attgccagtgattatgccactggtatgagaatccaatcttatgatgatcagctacttcat
ttagcggctgacttagctcagaggttgttgcctgcatttgacactcctacaggtattcca
tttggatctattaatttaaagtatggagttgatgaaaatgaaagcaagataacatcaact
gctgctggtggtactttgacactggaatttggcatattgagtcgcttaactaataatact
gtttttgagcaagttacaaaaaattcagtgcgtggaatatggtcacgcagatcaaaactc
aaccttgttggtgcccatataaatgtctttactggtgaatggacacagaaggatgctgga
attggcacaagcattgattctttctatgaatatcttctaaaggcatatttattgtttgga
gatgaagagtacctgtatatatttcaggaggcttacaaggctgccatgcactatctccat
catgacccttggtatgtggaggtcaatatgaattcaggtgctactgtttggccattattc
aatagcctgcaggcattctggccaggacttcaggttttagccggagatgttgatcctgct
attcgaacacatgatgccttcttcagcgtctggaaaaagtatggtttcacccctgaaggt
tttaatcttgctacatcaactgtccagaatggacaacgcagctacccgttacggccagag
ttgattgaaagcacatattggttgttcaaggctaccagagattatagatatattgatgtt
ggaagggacatattagcaagccttcaatatggtgctagatgcccttgtggctactgccac
atatcagatgtggaaacccacaagcaggatgaccacatggagagtttcttccttgcggaa
acggtcaaatatctctggcttctttttgatttagctgctggacctgataacattgttgaa
aatggaccatataagtatatatttagtacagaaggtcatttgctacctgttactcctgag
atagccttggtagatgagcattgttcgtattttggagcattctgtaatggcagtgcagcc
cggggatatggtacaagtgctagttctactaagtatcaaaaagcaaactatactcagtta
gatgatatccaaaccccttccagtcaccatccagcatccaacatttttgcaacaagaggt
tacatcaagggagtttgtccaggattgactcatgcacagaaacttgggatatcgtattct
gatgaagagggtaacgttatagagcagacttctgaaagtcatgagcatcatggtgaatct
gcagtagaatctagcgtccaagtccaatcaagtaatattatactgatctctcacccagtt
gcaagtcaacaggatcaggcttttgggaggtggtctggaactggagatcatgcagatatt
gtggtaactgctgattctgattctgtaagccatgataatactgacggctcacttggagtg
aacactgaagaacttaccaaggatactgaacgctcctccaaacagtctgcagatgaagat
gttgctcagaatttgatgtcgaatgaagatatcagctga
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