Panicum virgatum (switchgrass): 120672320
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Entry
120672320 CDS
T07260
Name
(RefSeq) glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like
KO
K10527
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.35
1.1.1.211
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00071
Fatty acid degradation
pvir00592
alpha-Linolenic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01212
Fatty acid metabolism
Module
pvir_M00087
beta-Oxidation
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
120672320
00592 alpha-Linolenic acid metabolism
120672320
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
120672320
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
120672320
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
120672320
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
120672320
NCBI-ProteinID:
XP_039808587
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Position
5N:23765969..23772358
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AA seq
723 aa
AA seq
DB search
MAAKGRTELEVGADGVAVITICNPPVNSLSVDVLYSLKESYEEALRRNDVKAIVVTGKGG
KFSGGFDISSFGGVQGGKTLQPKVGYIAIDILTDTLEAATKPSVAAIDGLALGGGLEVAM
ACHARIATPMAQLGLPELQLGIIPGFGGTQRLPHLVGLTKSLEMMLLSKPIKGGEAHELG
LVDALVSPNDLVNTARQWTLDIYELRRPWIKSLYKTDKLEPLGEAREILKFARAQAQKQA
ANLHHPLVCIDVIEEGIVAGPRAGLWKEATAFQDLLFSDTCKSLVHVFFSQRATSKIPGA
TDLGLMPRKISKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSR
VRKGKMTDERYEKAMSLVTGVLDYEHFKDVDLVIEAVIENVKLKQQIFSDLDKYCPSHCI
LATNTSTIDLNRIGEKTKSQDHIVGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKK
IKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLGMDVYKIDRACTKFGMPMGPFRLADLV
GFGVAVATGMQYLENFPERVYKSMLLPLMMEDNRAGEATQKGFYKYEGKRKATPDPEIMK
YIEKSRSMAGVTPDPELLKLSEKDIVEMVFFPVINEACRVLDEGIAVKASDLDIASIFGM
GFPPYRGGVMYWADSIGAKYIHGKLEEWTNRYGGFFKPCSYLADRAAKGIPLSAPAKKVQ
ARL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaaggggaggacggaactggaggtgggcgccgacggcgtcgccgtcatcacc
atctgcaatccgccggtcaactcgctctccgtcgacgtcttatatagcttaaaggaaagc
tatgaagaagcccttcggagaaatgatgtcaaagccattgttgttacagggaaaggagga
aaattttctggaggatttgatattagttcattcggtggtgttcagggaggcaaaacgttg
caaccaaaggttggttatatagcaattgatatcctcacagataccctagaagctgcaaca
aagccatcggtggcagcaatagatggtcttgctcttggtggtggattagaagttgccatg
gcatgccatgcacgtattgcaactccaatggctcagttaggtcttccagaacttcaactt
ggaattattccaggatttggagggacacaacgactcccacatcttgttggactgacaaaa
tctctggaaatgatgttgctatctaagccaatcaagggtggtgaggcacatgaactgggt
ttggttgatgccttagtttctcctaatgatttggtgaatactgctcgtcaatggactttg
gatatatatgaacttagaaggccatggatcaaaagcctttacaagactgacaagctagaa
cctcttggagaggctagggaaattctgaagtttgcaagagctcaagctcaaaagcaagca
gctaatcttcaccacccacttgtttgtattgatgtcattgaagaaggcattgttgcagga
ccaagagcagggctctggaaggaagcaaccgctttccaggacctgcttttttcagataca
tgtaaaagcttggtccatgtgtttttttctcagagggcaacatcaaagattccaggtgct
acagacttggggttgatgcctaggaaaataagtaaagttgccatattaggtggtggactt
atgggttcaggaattgcaaccgcaatgatattaagtaactatcctgtgatacttaaagaa
gtaaatgaaaagtttctaaatgctggcattgacagaatcaaagccaatttgcagagccgg
gtgcggaaagggaaaatgaccgacgagagatatgagaaggctatgtctcttgtcacaggt
gtccttgattatgaacatttcaaagatgtggacctagttattgaggcagttattgagaat
gtgaagttgaagcagcaaatattttctgacttggacaagtactgtccttcccattgtatc
cttgctactaacacatctacgattgatcttaatcgaattggagagaaaacaaagtctcaa
gatcatattgttggtgcacacttctttagtcctgcgcatgtaatgccacttctggaaata
gtccgtacccagcacacctcaccacaagttgttgttgacttgttggatgtcgggaagaag
ataaaaaagacaccgatagtggttgggaactgtactggctttgcagttaacaggatgttc
tttccgtacactcaatcagcactcttctatgttgatcttggtatggatgtttataagatt
gatcgtgcctgtaccaaattcggaatgcccatgggtcctttcagactggcagacctggtt
ggatttggtgtggctgtggccactggtatgcaataccttgaaaatttcccagagagggtc
tacaaatcaatgctacttcctctcatgatggaggacaatagggctggtgaggccacgcaa
aagggattttacaagtatgagggaaagaggaaggccacacctgatcctgaaatcatgaaa
tatattgaaaagtctaggagcatggcaggagttacaccggatcctgagttgctgaagcta
agtgagaaagacatagttgagatggtgtttttcccggtgataaatgaagcctgccgggtc
cttgatgagggtatcgcagtcaaagcttctgaccttgacattgcctccatctttggcatg
ggattcccaccttacaggggaggtgttatgtactgggcggattccattggtgcaaagtac
attcatggaaagttggaagagtggacaaaccgatatggcggcttcttcaagccttgttct
taccttgctgatagagctgcaaaagggattcctctgagcgcaccggcaaagaaagttcag
gctcggctataa
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