Panicum virgatum (switchgrass): 120673641
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Entry
120673641 CDS
T07260
Name
(RefSeq) probable glutamate carboxypeptidase LAMP1 isoform X1
KO
K01301
N-acetylated-alpha-linked acidic dipeptidase [EC:
3.4.17.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120673641
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.21 glutamate carboxypeptidase II
120673641
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
120673641
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Gene cluster
GFIT
Motif
Pfam:
TFR_dimer
Peptidase_M28
PA
Peptidase_M20
NB-ARC
Nicastrin
Tmpp129
YabA
Motif
Other DBs
NCBI-GeneID:
120673641
NCBI-ProteinID:
XP_039810520
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All DBs
Position
5N:complement(56238310..56258561)
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AA seq
743 aa
AA seq
DB search
MAAAAMATSRSVKQRQPLLQSPTPAAGNGGSAAGRRRFLTFLAVTAALVASYHLLEPTNS
SRYHALFLTLGSNATAAAHLRALTLRPHVAGTEANAAAARYVLHAFSSLSFPAHITPYSV
LLSYPAHRSLTLAAASGLAARPFSLVQETYKSDPFAEASAEVIPMYFAYSASGSVAAEVV
YANYGHNEDYAYLASRGVDVAGKVALVRYGDIHCEDMVRNARAAGAAAAIVYTDAKDFGG
SAAKGAERKWFPDARWLPPTGVQVGTLYYGNGDPTTSMWPSCAAGDDCERLSAEDLSGSE
AMPGIPALPVSARDGETILKAMAGDVAPPKWQGGEGAPVYRLGPGPAVLNLTYIGNETLA
TIENVYAVIQGKEEPDRHVIIGNHRDAWTFGAIDPNSGTAAMLEIAERLSKLQAKGWRPR
RTIILCSWDTEEFALIGSTEWVEENMDTLASRAIAYLNVDISVFGPGGLKPRATPQLDEF
IKEASKMVPDPDEPSQTLYDTMMRHHPPITRVAGAGTDFAAFLQHVGVPTLDMSYGLFEE
YPVYHSLYDDYVWVERFGDPLFHRHVAVASVWGLIALKLADDEIIPFNYISYASELEECA
KDIAEKCKGFPVTLSPLQKSIRQLESAATKIHEEKKLLQAENWSLKTRQYTLKVREINDR
LMMAERAFTNREGLAGRPWYKHMIYASSGQDDWGTKAFPGIVSAMDKAKKSNTTESWRSL
QHEIYRVARAVSKASAVLDGGLT
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcagccatggccacgtctcgctccgtcaaacagcggcagccgctcctccag
tctcccacgcccgccgccggcaacggcggcagcgcagccggaaggcgcaggttcctcacc
ttcctcgccgtcacggcggctctggtcgcgtcgtaccacctcctcgagccaaccaattcg
tcgcgctaccacgcgctcttcctcaccctcggctccaacgccaccgcggccgcccacctc
cgcgcgctcaccctccgcccccacgtcgccggcaccgaggccaacgcggccgcggcacgc
tacgtgctccacgcgttctcctccctctccttccccgcgcacatcaccccttactcggtg
ctcctctcctaccccgcccaccgctccctcaccctcgccgcggcgagcggccttgccgcc
aggcccttctccctggtgcaggagacctacaaaagcgacccgttcgccgaggcctcggcg
gaggtcatcccgatgtacttcgcctactcggcgtccggctcggtcgccgccgaggtcgtc
tacgccaactacgggcacaacgaggactacgcctacctcgcctcccgcggcgtcgacgtc
gcgggcaaggtcgcgctcgtgcggtacggcgacatccactgcgaggacatggtgcggaac
gcgcgcgccgcgggcgccgccgccgcgatcgtgtacaccgacgccaaggacttcgggggc
agcgccgccaagggggcggagcggaagtggttccccgacgcgcggtggctgccgccgacc
ggcgtgcaggtggggaccctgtactacgggaacggcgacccgaccacgtcgatgtggccg
tcgtgcgcggcgggggacgactgcgagcggctgagcgcggaggacctgagcgggagcgag
gccatgcccggcatcccggcgctgccggtgtcggccagggacggcgagacgatcctcaag
gcgatggccggcgacgtggcgccgccgaagtggcagggcggcgagggcgcgcccgtgtac
cgacttggccccggcccggccgtgttgaatctcacctacattggaaacgagaccttagca
accatcgaaaatgtttatgcggtgatccaagggaaagaagagcctgacagacacgtgatc
ataggcaaccatcgtgatgcgtggacatttggagcaattgatccaaacagtggaacagca
gcaatgcttgagatcgcggagcggctgtccaagctacaagcaaaagggtggaggcctaga
cgaacgataatcctgtgcagttgggacacggaagagtttgctctgatcgggtcaactgaa
tgggtcgaggagaacatggacactctagcttcgagagctattgcttacctgaacgtggac
atatcagtgtttggtcctgggggtcttaaaccccgtgcaacccctcaacttgatgagttt
atcaaagaagcgagtaaaatggtacctgatcctgatgaaccatctcaaaccttgtatgac
acaatgatgcgccatcatccaccgataactagagtggctggtgctggaactgattttgca
gcatttctccagcatgttggggtcccaacacttgacatgtcttacggactgtttgaagaa
taccctgtttaccactctctgtatgatgattatgtttgggtggagaggtttggagacccc
ttgttccacaggcatgttgcagtggccagcgtctggggtttgattgctctgaaacttgct
gacgatgagatcatacccttcaattatatctcttacgcgtccgaattggaggaatgcgca
aaagatatcgcagagaaatgtaagggattccctgtcactttatctcctttacagaagtcc
atcaggcagcttgagagcgcagccactaaaattcatgaggagaagaagttgctgcaagca
gaaaactggagcctaaagacaaggcagtacacactgaaagtcagggagataaacgaccgg
ttgatgatggctgagcgagcgttcaccaaccgagagggactcgccggcagaccatggtac
aagcatatgatctatgcatcgtcgggtcaggatgactggggcaccaaagcattccccggt
atcgtctcggccatggacaaggccaagaagtccaacacaaccgaatcctggcggtcgctg
cagcatgagatttacagggtcgcaagggcggtctccaaggcttctgcagtccttgatggt
gggctaacatga
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