Panicum virgatum (switchgrass): 120673914
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Entry
120673914 CDS
T07260
Name
(RefSeq) phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform X1
KO
K11808
phosphoribosylaminoimidazole carboxylase [EC:
4.1.1.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00230
Purine metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
120673914
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.21 phosphoribosylaminoimidazole carboxylase
120673914
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GFIT
Motif
Pfam:
AIRC
ATP-grasp
RS_preATP-grasp-like
PurK_C
Dala_Dala_lig_C
CPSase_L_D2
ATP-grasp_3
2-Hacid_dh_C
PurT_C
Fe-ADH_2
Motif
Other DBs
NCBI-GeneID:
120673914
NCBI-ProteinID:
XP_039810890
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Position
5N:complement(3475643..3482048)
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AA seq
620 aa
AA seq
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MRARLLSAPSAAASSSLPSAGVRPRRAFWRPRAPAAATPLSLPARASMQPAAPLPERQGG
LPVHGVSNTVVGVLGGGQLGKMLCQAASQMGIKMVILDPLQGCPASSVCHEHVVGSFSDG
DAVREFAKRCGVLTVEIEHVDAATLEKLEEQGFDCEPKASTIMIIQDKYRQKKHFSKFGI
PLPDFMEVDTLHSIEEAGERFGYPLMVKSKRLAYDGRGNAVAQKKEDLSSVVASLGGFEH
GLYVERWTPFVKELSVIVARSRDGSTVCYPVVETIHKDNICHIVEAPAEVSAKIKKSATD
VAEKAIKSLEGAGVFAVELFLTEDDEILLNEVAPRPHNSGHHTIESCYTSQYEQHLRAIL
GIPLGDPSMKAPAAIMYNILGEDEGEAGFFLAHQLIERALNIPGASVHWYAKPEMRKQRK
MGHITIVGPSKASVKSRLDKLLQRDTYDPKKASPRVSIIMGSDSDLNVMKDAEVILKKFN
IPVETTIVSAHRTPERMYDFAKSAYGRGIEVIIAGAGGAAHLPGMVASLTSLPVIGVPVK
TQSLSGLDSLLSIVQMPKGIPVATVAIGNAENAGLLAVKILAKRDPELTDKVLKYQDDLR
DMVLEKAERLENVGWEEYLK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccaggctcctcagcgccccgtccgccgccgcctcctcctccctcccctccgcg
ggcgtccgcccgcgccgcgcgttctggaggccccgggcccccgccgccgcgacgccgctc
tcgctgcccgcccgagcctccatgcagcccgccgcgcccctgcccgaacggcagggcggc
ctgccggtgcacggcgtgtccaacacggtggtcggggtgctggggggcggccagctgggg
aagatgctctgccaggcggcgagccagatggggattaagatggttatcctggatcccctc
cagggctgcccggcgagctctgtttgccacgagcacgtcgtggggagcttcagcgacggc
gacgcggtccgggagtttgccaagaggtgtggggtcctaacagtggagattgagcatgtt
gatgccgcaacacttgagaagctggaagaacagggttttgattgcgagcctaaagcctct
acaatcatgattattcaggacaagtacaggcagaaaaagcatttctcaaaatttgggatc
cctttgcctgacttcatggaagtagatactttgcacagtatagaggaagcaggggaaagg
tttggctatcctctaatggtaaaaagcaagaggttagcatatgatggtcgaggcaatgca
gtcgcccaaaagaaagaggatctatcttctgttgttgcttcattgggtgggtttgagcat
ggattgtatgtcgagcgatggactcctttcgtgaaggagctttctgttattgtggcaagg
agcagagatggttctacagtctgctatcctgttgttgaaaccatacacaaggataacatc
tgtcatattgtcgaagctcctgctgaggtatcagccaaaataaagaagtcagctactgat
gtggctgaaaaagctatcaaatcattagaaggtgctggtgtgtttgctgtagagttattt
ttaacagaagatgatgagatcttattgaacgaggtagcccctaggcctcacaacagcggg
catcacacaattgagtcatgttacacctcacaatacgagcagcacttacgtgccattctt
ggaattccacttggtgatccttcaatgaaagcacctgctgcaataatgtacaacatcctg
ggagaggatgagggtgaagcaggattctttttggctcatcagctaattgagagggcatta
aatattccaggtgcatcagttcattggtatgcaaaaccagagatgcgaaagcaaagaaag
atgggtcacattacaatcgtgggaccttcaaaggcgagtgtaaaatcacgcctggacaag
ttgctgcaaagggacacgtatgaccccaagaaagctagccctcgtgtttctataataatg
gggtctgattctgatcttaatgtaatgaaagatgctgaggtgatattaaaaaaatttaac
atacctgttgagactacaattgtttcagcacatcgtacaccagagcggatgtatgatttt
gctaagtctgcatatggcaggggtattgaggtcataattgctggcgcaggcggagcagct
cacttaccagggatggtagcttcattgacttctcttccagtaattggagtacccgtcaag
actcagtcgctttcaggacttgattccctcctatctattgtccaaatgccaaaaggtatt
cctgttgcgactgttgctattgggaatgctgaaaatgcaggcttgctggcagttaagatt
ctggcgaaaagagatcctgagcttacggataaggtgcttaaataccaggacgatctgcgg
gacatggtcttggagaaagcagaaaggcttgagaacgtaggctgggaggaatatctgaag
tga
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