Panicum virgatum (switchgrass): 120674049
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Entry
120674049 CDS
T07260
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial-like
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00785
Lipoic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120674049
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
120674049
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
120674049
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GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
120674049
NCBI-ProteinID:
XP_039811065
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Position
5N:48699254..48707563
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AA seq
1032 aa
AA seq
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MYPYTFRGSPPLCSLLLIRQAAHPKHFLHGVRCREATIHHQVQLGTSRCGYRFHPKSGNH
PLWHQRHPSHPHSVLHSASDVAYDIEELWHAWQADPSSVAELWSNFFGSLEAKASTSAVA
ASQTLQETMQLLHLVADFQIHGHTMAKLDPLGLDVPDDIDLSLYHFTEADLDRKFFFGFS
TMSGLLSDYNPVVTLREILRKLRQAYCGSVGYEYMHIPDRDKCQWLRDRIETGKPHDDND
KNRRLVVLESLTRATLFESFLAARCPASKRYGIAGSETLIPGVEALFDRAAELGVENIVI
GTSHRGRLNLMANVLGRSISQIISELTVGPRPVQVADGKDPIFTGTGELYFQRGVSCDRP
THGGKNVHLSLVAGPCHLEAIDPVVMGKTREKQFFSGDVGRTRTMSVLVHGDGAFTGQGV
VYETLNLSALKNYTTGGTVHVVLNNRVAATADRSAGRSSRYCTDVARALGAPVFHVNGDD
VEAVVRVCKLAAEWRQTFHSDVVVDLVCYRRFGHNELDDPTLTLPEMYQVIKNHPSSLNL
YEQKLLGAGEVSNEDVQKVHDKVNISLDEEFAKSKDFVVSKRDWLSASWTGFKPPEQISH
VFDTGVKQDRLKLVGRAITRLPVNFKPHRAVEKLLKQRVAMIETGEKIDWAFAEAPAFAT
LVEEGNHVRLSGQDVERGNFNQRHAILHDQETGARYCPLDNVVMNQNEGLFTVSNSLLSE
YAVLGFEMGYSMENPNSLVLWEAQFGDFANCAQVIFDQFLSCAEARWLRQTGLVVLLPHG
YDGQGPDHSGAHLERFLQMCDDNPFVIPEMEPTLNRQIQECNWQIVNVTTPANYFHVLRR
QIHREFRKPLIVMAPKNLLWHKDCKSNISEFDEVEGHPGSRNQGTRFKRLIEDCNNHNST
EESVNRLILCSGNVYYELRDEHENSGRTDIAICRVEQLCPFPYDLVQRELKRYPNAEIVW
CQEEPMNMGAYNYVSPRLRTAMRALGRGSFEDIKYVGRAPSASAATGFPSVHVQEQSELL
KKALEPEPIKNW
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtatccctacactttcagaggttcgccaccattgtgtagcctcctgttgattcgccaa
gccgcacatccaaaacattttttgcatggggtaaggtgtcgcgaggcaactatccatcat
caggtgcaactgggtacaagtcgatgcggctaccggttccatcccaagtccggcaaccac
ccactgtggcatcaacgtcacccttcccacccccacagtgtcctccacagcgccagcgac
gtcgcctatgacattgaggagctctggcatgcctggcaggccgatccctcctccgttgct
gaattatggagcaacttcttcggcagcttggaagcaaaagcctccacctccgccgtcgcc
gcaagccaaaccttgcaagagacaatgcagctactccacctggtcgccgatttccagatc
cacggccacaccatggccaagctcgacccactcggcctcgacgtcccggatgacatcgac
ctcagcctctaccacttcacggaggccgacctcgacaggaagttcttcttcggtttctcg
acgatgtcgggcttactttctgactacaacccggtcgtcactctccgcgaaatcctccgg
aagctccggcaggcctattgcggcagcgtcggttatgaatacatgcacatcccggacagg
gacaagtgccagtggctcagggacaggatcgagaccggcaagccccacgacgacaacgac
aagaaccgtcgcctcgtcgtgctcgagagcctcacccgggccacgctcttcgagagcttc
ctcgccgccaggtgccctgcttccaagcgatacggcatcgccggcagcgagacgcttatc
cctggcgtggaggcattgttcgacagggcagccgaactcggcgtcgagaacatcgtcata
gggacgtcgcacaggggtaggctcaacctcatggccaacgtcctcggcaggtccatatcg
cagataatcagcgagctcaccgtcgggccgaggcctgtccaagttgctgacggcaaggac
ccgatcttcaccggcaccggcgaactctacttccagcggggcgtctcctgcgacaggcct
actcatggtggcaagaatgttcacctgtcattggtcgcaggtccctgccacctcgaggcc
atcgaccccgtcgtcatgggcaagacgcgcgagaagcagttcttctccggcgatgtcggc
aggacgaggaccatgagcgtcctcgtccacggtgacggtgccttcaccggccagggagtg
gtttacgagacgctcaacctgagcgccctcaagaactacaccaccggagggaccgtccac
gtcgttctgaacaaccgggtcgccgccacggccgatcggagcgccggcaggtcgtcccgg
tactgcaccgacgtcgccagggccctcggcgccccggtattccacgtcaatggcgacgat
gtggaggcggtagtccgcgtgtgcaaacttgcagctgagtggcgtcagacgttccattcg
gatgtggtggttgatctggtctgctaccgccgattcgggcacaacgaacttgacgatccc
accttgacgctgccagaaatgtaccaggtgattaagaaccatcccagttcattgaacctg
tatgaacaaaaactcctaggggcaggcgaagtttcaaatgaagatgtacaaaaggtccat
gacaaagtgaacatatccttagatgaagagtttgcaaagagcaaagattttgttgtcagc
aagagagactggctctcggcttcttggactggcttcaagccacccgagcagatatctcat
gtatttgatacaggggttaagcaggacagactgaaacttgttggacgggcgattaccaga
ctacctgtgaacttcaagccccatagagcagtggaaaagcttctgaagcagcgtgtcgca
atgatcgaaaccggtgagaaaatcgattgggcgtttgcagaagcgcctgcctttgcgaca
ctagtagaagaaggcaatcatgttaggctaagtgggcaggatgtggagagagggaatttc
aaccaaaggcatgcgattctacatgaccaagaaactggagcgagatactgcccgttggac
aatgttgtgatgaatcagaatgaggggctgtttacagttagcaacagtctactttcagaa
tatgctgttcttgggtttgaaatgggttactccatggagaatccgaactcactggttctc
tgggaagctcaatttggtgactttgccaactgtgcgcaagtgatctttgaccaatttctg
agctgcgcggaggcaagatggttgcgccaaactgggcttgttgttctactgccacatggt
tatgatggccaaggccctgatcactctggggcccatttggagcgcttcctccagatgtgt
gatgacaatcccttcgttatacctgagatggaaccaacgctcaacaggcagatccaggag
tgtaattggcaaatcgttaatgtgacaactcctgcaaattattttcatgtgttgcgtcgt
cagatacacagggagttccgaaagccactgattgtcatggctcctaagaacttactctgg
cacaaggactgcaagtccaatatctccgagttcgatgaggttgaaggccatccaggatct
cgtaaccagggaacacgcttcaaacggctgatagaggattgtaacaatcataattcaact
gaggaaagtgttaatcgtctgatattgtgctctgggaatgtgtactatgaacttcgtgac
gagcatgaaaactcaggccgtactgatatcgcgatctgcagagtcgagcagctttgccca
ttcccatatgatcttgtccagagagagctaaaacgatatccaaatgcggagatcgtgtgg
tgccaagaggagcccatgaacatgggtgcatacaactacgtctctccccggctgcgcaca
gctatgagggcccttgggcgaggctcctttgaagacataaagtatgtaggcagggctcct
tcagcatctgcagccacagggttcccgtccgttcatgtccaagaacagtcggagctgctg
aagaaggcgttggagccagagccgatcaagaactggtga
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