Panicum virgatum (switchgrass): 120679108
Help
Entry
120679108 CDS
T07260
Name
(RefSeq) putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
KO
K00921
1-phosphatidylinositol-3-phosphate 5-kinase [EC:
2.7.1.150
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00562
Inositol phosphate metabolism
pvir01100
Metabolic pathways
pvir04070
Phosphatidylinositol signaling system
pvir04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
120679108
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
120679108
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120679108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120679108
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.150 1-phosphatidylinositol-3-phosphate 5-kinase
120679108
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Macropinocytosis
Kinases
120679108
Endosome - Golgi transport
Others
Others
120679108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIP5K
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120679108
NCBI-ProteinID:
XP_039816553
LinkDB
All DBs
Position
2K:complement(44100371..44107774)
Genome browser
AA seq
1630 aa
AA seq
DB search
MGVLEFAVGKARSLTAAADHERCRVQKGDLARIETRRRQEAGDGAGTPRARGAASPVGPP
TPPRRALEARSGGEGDAGPRGRHPCRDIRRVEEEEEAADEPRSQFLAPGTDFYNDYSDTD
SSVSVSNSMYRSMTLSPAESPTFLVRLDDTSDHEVTTITDSDDAREQVTISVTDEGEEVN
TSPPIVDFGDDIWCPPPPEDERDDVESRIFGIDDEDDDILSEPSCFTANKIAGANGVFGG
AHKDGVQNDLLKHFRALVAQLLKGEGITLASDNDSKSWLEIVSSLAWQAANYVKPDTKKG
GSMDPGDYVKIKCIASGNPPDSNFVRGIVCSKNVRRKRMVAEHRNAKLLILGGALEYQKV
SNKLASIGTILEQEKEHLRTIVGKIESRQPNVLLVEKSASSFAQELLAKDISLVLNVKRP
LLDRIARCTGGQVVSSIDNIVSARLGQCDLFKVEKVPESTSAEHTEKGSNKTLMFFEGCL
KRLGCTVLLRGNCREELKKIKRAMQLAVFAAYHLSLETSFLADEGATVPRTPLMSLIDAP
DLQTHRDYVSAGPADHSIPDNLRDTEEKYPHDASISQIFENISASSTLLAPSTLLPFDGV
SQGTVLECRASEFPVDHANSQDLSSSCHPNASCIKNLISPCSLSDGFRTSCAITNYDDPY
RFLHSSIACGACNDRASDPCPLENCRSRPSTDNLQSGNTDTKDKLSAGYLSGTDNNQSIL
VSLSSTCIPKSLACERSHLLRIKFYGSFDKPLGRYLREDLFDQAYCCPSCKEPSESHVRC
YMHQHGSLTISVRRLLSQKLPGEHDGRIWMWHRCMRCKLKDGMPPATHRVIMSDAAWGLS
FGKFLELSFSNHMTANRIASCGHSLQRDCLRFYGYGNMVAAFQYSPMVTLSVNLPPPVLD
FSFHATQEWVKREAVEVFGHMESLHREVYDLLHNIEKSIITDDDSVKTSMQRQITEMKDL
LNIERNEYEALLLPVIRGNAHSFKSKVDILELNRIRRGLLLDAHTWDRRLCGIDSLKEGG
HVSRTDSSNQEKPQGTNEVRPEFHQTVTRLAGTYQESCPRRSSGSPRKSLLSTEGHSKDH
QAVMAEKDLPIGLVDGVACDAGGLDLVFSNIYEGHHPSEDPIKTDPVERLPSLASILADK
IDMAWSGSGELHCNLPHDLTKAENRSFTLLSNPSCKKATAPVRIHSFDAVLRLHQREQTG
LVPASLHSSLKPADSFRDLTSLVKDPMTNMRRAFSQISPRTRGNLNDVLTRAPKYITSAS
DMVKNGARLLLPNISCEGSVIVTVYDDEPTSVVSYAMTSQEYVEHVSRKMNANPSFSDLT
KVSSNRLDRSSSNEDLSDLKGSHFRFYFDDDASPADSTKFSVTCYFARQFDALRKKCCPS
DIDYIRSLSRCKRWSAQGGKSNVYFAKTMDERFIIKQVTKTELDSFVEFAPHYFRHLTES
LSSRSPTCLAKIMGLYQVGIKSLKGGREVKMDLMVMENIFFQRTISRVYDLKGSVRSRYN
SDTSGPNKVLLDSNLIEALRTKPMFLGSKAKRRLERAVWNDTSFLASLDVMDYSLLVGID
EEKKELVVGIIDFLRQYTWDKQLETWVKASGILGGPKNESPTVISPIQYKKRFRKAMSRY
FLGVPDQWTS
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgctggagttcgcggtggggaaggccagatccctcaccgccgccgccgaccac
gagcggtgccgcgtgcagaagggcgacctcgcgcggatcgagacgcggcggcgccaggag
gcgggcgatggcgcgggcacgccgagggcccggggcgccgcctcgcccgtcggcccgcca
acgccgccgcgacgcgcgctcgaggcgagatctgggggcgaaggcgacgccggcccgcgc
ggtcgtcatccctgtcgtgatatcaggcgagtggaggaggaggaggaggctgctgacgaa
cccaggtctcagtttttagccccagggactgacttctataatgactattcagatacagat
tctagtgttagtgttagtaactcaatgtacagatcgatgaccctaagccctgcagagagc
cctactttcttggtgaggctggatgacacttctgatcatgaggtgaccacaatcactgat
tcagatgatgcgcgggagcaagtcactatcagcgtcactgatgaaggagaagaggtcaac
acatcacccccgattgttgattttggtgatgatatttggtgcccaccacctcctgaagat
gagagagatgatgtcgaatcaaggatatttggaatcgatgatgaggatgatgatatttta
tcagaacctagttgcttcactgctaataaaatagctggtgccaatggtgtctttggtgga
gctcataaagatggtgttcagaatgacttgctgaagcactttcgagctctagtagcacag
ttactgaagggggaaggcattactttggccagtgacaacgattccaaaagttggcttgag
atagtgtcctcgttggcatggcaggctgctaactatgtgaaacctgataccaagaaaggt
ggcagcatggatcctggtgactatgtgaagattaaatgcatagcatctgggaacccacct
gatagcaattttgttagaggcattgtttgctccaagaatgtaaggcgcaaacggatggtt
gcagagcacaggaatgcgaaattgctcattttaggaggggcccttgagtaccagaaagta
tcgaataaattagcatccatagggactatacttgaacaggaaaaggaacatttaagaact
attgttggaaagattgagtctaggcagcctaatgtgcttctagttgagaaaagcgcctca
tctttcgctcaggagctcttagcaaaagatatttcattagttctgaatgtgaagaggcca
cttttggataggatagcgagatgcacaggtggtcaggttgtctcatcaattgacaacatt
gtctctgcaaggctaggacagtgtgacttgttcaaggtggagaaagttccagaatccaca
tcagcagaacacacagagaaggggtcaaataagactctgatgttctttgaaggctgtctg
aaacgcttgggttgcacggttctgctgagagggaattgccgggaagaattaaagaagatt
aagcgtgcaatgcaacttgcagtctttgctgcttatcacctctccctggagacatcattc
cttgctgatgagggtgcaacggttccaagaactcctttgatgtctttgatagatgcgcca
gatctgcaaacccatagagattacgtctctgctgggcctgctgatcatagtattcctgat
aaccttagagacactgaagagaaatacccacacgatgctagtatcagccagatatttgag
aatatctctgcatcatcaactctgttagcaccatcaactctgttaccatttgatggggta
agccagggaaccgtgcttgaatgtagagcatctgaatttccagttgaccatgccaactct
caagatttgtcaagctcatgccatccaaatgcttcatgcattaaaaatttaatatctcca
tgttccctcagtgatggcttcagaacatcatgtgctatcacaaattatgatgacccatac
aggtttttgcattcttcaattgcttgtggtgcctgtaatgatagggcgtcagacccatgc
ccgttggaaaactgtagaagtcgcccctcgacagacaacttacagtcagggaatacagat
accaaagacaagctttctgctggttacttatctggtaccgacaacaatcagagcatccta
gtttcgctctcaagtacctgcatcccaaaaagcttagcatgtgaacgttctcacctcctc
cgcatcaaattttatggtagttttgacaagccactagggaggtacctccgcgaggactta
tttgatcaggcgtattgctgcccatcatgcaaggagccttcagaatcacatgttaggtgc
tatatgcatcagcatggcagcctaacaatcagtgttagacgccttctgtctcaaaagtta
ccaggtgaacatgatggaaggatatggatgtggcacagatgtatgaggtgtaagcttaag
gatggaatgcctccggcaacacatagagtaattatgtctgatgctgcttggggcctatca
tttggcaagttcctggagctgagcttctcaaatcatatgactgctaaccgaattgcgagt
tgcggccattctctccaaagggattgccttcgtttctatgggtatggaaatatggttgcc
gcctttcagtatagtcccatggttactctctctgttaaccttccacccccagtgctagat
ttcagtttccatgctacacaagagtgggtcaaaagagaggcagttgaggtatttggccat
atggaatccttgcacagggaggtatatgatttacttcataatattgagaagagtatcatc
actgacgatgattctgtgaaaacaagcatgcaaaggcagataacagagatgaaggatttg
cttaacattgaaagaaatgagtacgaggctttgcttctaccagttataagggggaatgct
cattcatttaaatcgaaggttgatattttggagctcaaccgtatcagacgcggtctgctc
ctagatgctcacacctgggaccgcaggttgtgtggcatagattcacttaaggaaggtggt
catgtttccagaactgattcctccaatcaagagaaaccccaagggaccaatgaagtgaga
cctgaatttcatcaaacagttacaagacttgcaggtacctatcaagaatcatgtcctcga
cgctcttcaggaagtccaaggaaatctctcttgtctacagaaggccactcgaaagatcat
caggctgtcatggctgagaaagatttgccaattgggctggtggatggtgttgcatgtgat
gcaggaggtcttgatttggtcttcagcaatatatatgaaggacatcatccatccgaagat
cctattaagacagatccagtagagaggttaccgtcacttgcatctattttagcagacaaa
atagatatggcatggtctggatctggtgaattacactgcaatcttccacatgatttgacc
aaagctgaaaatagatcttttacgttgctgagcaatccaagttgcaagaaggctactgcc
ccagtccgaatccactcatttgatgctgtattgagattgcatcagcgggagcaaactgga
ttagtgcctgcttcattgcattcatcattgaaaccagctgattcctttagagacttgacg
agccttgtgaaggatccgatgacaaacatgcggagagcgttttctcaaatatctcccagg
actagaggaaacttgaatgatgttcttacacgtgctcctaaatatataacatcagcttct
gatatggtgaagaatggggcacgattgcttctgccgaatatcagctgcgaaggttctgtt
atcgtcactgtctatgatgacgagccaaccagtgttgtgtcatatgccatgacatcgcaa
gagtatgttgagcatgtttcgcgtaaaatgaatgcaaaccccagcttttcagatttgact
aaggtcagcagtaatagacttgacagatcttcctcgaatgaggacctttcagatttgaaa
ggatcccacttcaggttctatttcgatgatgatgcatctcctgcagatagtactaagttt
tctgtcacttgctattttgcaaggcagtttgatgcactcagaaagaaatgttgtccaagt
gatattgattacatacgctcacttagtcgctgtaagcgatggagtgcccaaggtggaaaa
agcaatgtttactttgcaaagacaatggatgagagattcattattaaacaagtcaccaaa
acggagctggactcttttgtagaatttgctcctcactacttcaggcacttgacagagtca
ttgagttccagaagcccaacttgccttgcgaaaataatgggactttatcaggttggtatc
aagagtttgaaaggtggacgtgaggtgaagatggatctgatggtgatggagaacattttc
ttccagagaacaatatctagggtgtatgatctgaagggttctgtgcgttcacgctacaat
tctgatacttcaggccccaataaagtccttttagattctaatctcatagaagcactacgt
acaaagcctatgtttttggggagtaaggcaaaaagaagattggaaagagctgtctggaat
gatacatcatttcttgcgtctttggatgtcatggactactcccttctggttggcatcgat
gaggagaagaaagagcttgttgtgggcatcatcgacttcctgcggcagtacacctgggac
aagcagctggagacatgggtgaaagcctcaggcatcttgggtgggccaaagaacgagtcc
cccactgtaatttctccaatccagtacaagaagaggttcaggaaggccatgtccaggtac
ttcctcggcgtgcctgaccagtggacctcctga
DBGET
integrated database retrieval system
