Panicum virgatum (switchgrass): 120681544
Help
Entry
120681544 CDS
T07260
Name
(RefSeq) anthocyanin regulatory R-S protein-like
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120681544
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120681544
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_INO4
GAF_NLP
GAF_2
Motif
Other DBs
NCBI-GeneID:
120681544
NCBI-ProteinID:
XP_039818996
LinkDB
All DBs
Position
7N:complement(40762965..40772919)
Genome browser
AA seq
565 aa
AA seq
DB search
MALPASLVRQDVPPGRQLRNQLAAAARTINWSYALFWSISSTQPGILTWTDGFYNGEVKT
RKIANSAEQTAEQLVMQRSEQLRELYEALLSGECDRRAARPVASLSPEDLGDTEWYYVVC
MTYAFRPGQGLPGRSFASNEHIWLCNAQHADSKAFPRALLAKGASIQTIVCIPLMSGVLE
LGTTDPVVEDPDLVSRATASFWDMQFPACSEEPSSSPSANETGKAADIIVLEDLYHNAME
IAGGQELDEAESLSNATLEHITKEIDEFYSLYEEMDVQPLEDSWIMDGSFEVPSSPQPAA
GASTDDAAISSTLFGGSRATSFAAWIGSASDSGEVAVPVIEEPQKLLKKVVAGGAWANNG
GGGTTRTTQEGGIIKNHVMSERKRREKLNEMFLVLKSLVPSIHKVNKASILAKTIAYLKE
LQRRVHELESSREPISRPSETRRLTKRHDDGIARKKVSAGAKRKGSELGGDMERERPWDL
SKDGTSNVTVTVSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASAPDGFMGLKI
RAQFASSAAVVPWMISEALRKAIGK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcactgccagcttctctggttcggcaagatgtgccgccggggaggcagttgaggaac
cagcttgctgcagccgcgaggaccatcaactggagttatgctctcttctggtccatttca
agcactcagccaggaatcctgacgtggacggacgggttctacaacggtgaggtgaagacg
aggaagatcgccaactcggcggagcagacagccgagcagctcgtcatgcagcgaagcgag
cagctgcgggagctctacgaggccctcctctccggcgagtgcgaccgccgcgcagcgcgg
ccagtggcgtcgctgtcgccggaggacctcggtgacaccgagtggtactacgtcgtctgc
atgacctacgccttccggcctggccaagggttgccgggcaggagcttcgccagcaacgaa
cacatctggctgtgcaacgctcaacacgccgacagcaaagccttcccccgcgcgctcctg
gcgaagggagcgtccattcagacaatcgtctgcatcccgcttatgagtggcgttcttgag
ctgggcacaactgatccggtggtggaggacccagacttggtaagccgagccacagcatct
ttctgggacatgcagtttccggcatgctcggaggagccgagctccagcccgtcagcaaac
gaaaccggcaaggccgccgacattattgtgttggaggacctctatcacaatgccatggaa
atcgccggggggcaggagctagacgaagcggagagcctgtcaaatgcaaccctcgagcac
atcaccaaggaaatcgacgaattctacagcctctacgaggaaatggacgtgcagccactc
gaggatagctggatcatggacgggtctttcgaagtcccctcttcaccgcagccggcggcg
ggggcttctactgacgatgccgccatctcaagcacgctctttggtggctctcgcgcgacg
agttttgcggcttggatagggtcggcgtcggactccggtgaggtggctgtgccggtcatc
gaagagccgcagaagttgctgaagaaagtggtggccggtggagcttgggcgaacaatggt
ggcgggggcacgacgaggacaacccaagagggtggcatcatcaagaaccacgtcatgtcg
gagagaaagcggcgagagaagctcaacgagatgttccttgttctcaagtcattggttccc
tccattcacaaggtgaacaaagcatccatccttgccaaaacgatagcctacctcaaggag
cttcagcgaagggtacacgagctggaatccagcagggaacccatctcgcgcccatcagaa
acaagaaggcttacaaagaggcatgacgatggcatcgccaggaagaaagtctctgcggga
gccaagaggaagggttcggagctcggcggtgacatggagagggagcgcccgtgggacctc
tccaaggacggcacgagcaacgtcaccgtcaccgtctcggacaaggacgtgctcctggag
gtgcagtgccggtgggaggagctgctcatgacgcgagtgttcgacgccatcaagagcctc
catttggacgttctctcggttcaggcatcggcaccagatggattcatggggctgaagata
cgagctcagtttgccagctcagctgccgttgtgccctggatgatcagcgaggccctgcgt
aaagctatagggaagtga
DBGET
integrated database retrieval system
