Panicum virgatum (switchgrass): 120683574
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Entry
120683574 CDS
T07260
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial-like
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00785
Lipoic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120683574
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
120683574
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
120683574
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Ortholog
Paralog
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
120683574
NCBI-ProteinID:
XP_039821597
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All DBs
Position
7N:25436883..25443456
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AA seq
1023 aa
AA seq
DB search
MGLFRAASGLARVALRRNLARAASSPFAGGAAPGAAPARYFHSTRPRRFAAPAPRAVPLS
RLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATTSPGLSGQTIQESM
RLLLLVRAYQVSGHLKAKLDPLGLEERPVPDVLDPAFYGFSEADLDREFFLGVWRMAGFL
SDNRPVQTLRSVLERLEQAYCGTIGYEYMHIADREKCNWLREKIETVNPREYTYDRRQVM
LDRLIWSTQFENFLATKWTTAKRFGLEGAETLIPGMKEMFDRAADLGVESIVIGMPHRGR
LNVLGNVVRKPLRQIFSEFSGGTKPVNEGEGLYTGTGDVKYHLGTSYDRPTRGGKHIHLS
LVANPSHLEAVDPVVAGKTRAKQYYSNDRDRTKNLGVLLHGDGSFSGQGVVYETLHLSAL
ENYTTGGTIHIVVNNQVAFTTDPKSGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCEL
AAEWRQTFHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKVIRNHPSALEIYQNKLLESGK
ISKEDIDRLNKKVSTILNEEFKNSKDYVPNKRDWLSAYWTGFKSPEQISRIRNTGVKPEI
LKRVGEAMTTLPENFKPHRAVKKIFDQRRQMIETGEGIDWAVGEALAFATLIVEGNHVRL
SGQDVERGTFSHRHSVIHDQETGERYCPLDNLVMNQDEELFTVSNSSLSEFAVLGFELGY
SMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVCLPHGYDGQGPEHSS
ARLERFLQMSDDNPYVIPEMDPTLRKQIQQCNWQVVNVTTPANYFHVLRRQIHRDFRKPL
IVMSPKNLLRHKDCKSNLSEFDDLAGHPGFDKQGTRFKRLIKDQNNHKDLEEGINRLVLC
SGKVYYELDEERRKTERTDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGA
YSYINPRLLTAMKALGRGSIEDIKYVGRAPSAATATGFYSVHVQEQTELVQKALQRDPIN
YSF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggctgttccgggcggcgtccggcctggcccgggtggcgcttcggcggaacctcgcg
cgcgccgcgtcgagccccttcgcgggcggcgcggcccccggcgccgcgcccgcgcgctac
ttccactccacgcgcccgcgcaggttcgccgcgcccgcgccccgcgcggtgccgctctcg
cgcctcaccgacagcttcctcgacgggaccagcagcgtctacctggaggagctgcagcgg
gcctgggaggcggaccccaactcggtcgacgagtcgtgggacaacttcttccgcaacttc
gtcggccaggcagccaccacctcgccaggcctctccgggcagaccatccaggagagcatg
aggctgctgctgctcgtcagggcgtaccaggtgagcggacacttgaaggccaagctggac
ccgctggggctggaggagcgcccggtcccggacgtgctggacccggcgttctatgggttc
tctgaagcggatttggaccgtgagttcttcctaggagtgtggaggatggcggggttcctg
tccgacaaccggcctgtgcagacgctgcgttccgtgttggagcggcttgagcaggcctac
tgtggcaccattgggtatgaatacatgcacattgctgaccgtgaaaagtgtaactggctc
agggagaagatcgagactgttaacccaagggagtacacctatgatcgtcgccaggtcatg
ctcgataggcttatctggagcacacagtttgagaatttcttggcgaccaagtggaccacc
gcaaagcggttcggtcttgaaggtgcagagactctgatccctggcatgaaggagatgttt
gacagggcagctgatcttggtgtagagagtattgtcattggtatgccacacagaggcagg
ctgaatgttttgggaaatgtcgtgcggaagcccttgcgacagatcttcagtgagttcagc
ggtggtaccaagcctgttaatgaaggggaagggttgtatacagggactggtgatgtcaag
taccatctaggaacttcgtatgataggcctaccaggggtgggaaacatattcatctgtca
ctggttgcaaacccgagtcatttggaagcagttgatcctgttgttgctgggaagacaaga
gcgaagcagtactactctaatgatcgtgacaggaccaaaaatttgggggtattgctgcat
ggtgatggtagtttctcagggcagggagttgtgtatgagaccctgcatctcagtgccctt
gagaactacaccactggtgggacaatacatattgtggtcaacaatcaggttgcattcact
actgatccaaagtcagggagatcctcacagtattgcactgatgtagcgaaagcattggat
gctccgattttccacgttaacggtgatgatttggaggccgtggttcatgtctgtgagctt
gctgcagaatggcgacaaacatttcactctgatgtggtggtggacattgtatgctaccgg
cgatttggccataatgaaatcgacgagccctccttcacccaacctaaaatgtacaaggtg
atccggaaccatccaagtgcgcttgagatttatcaaaataagctgttagaatctgggaag
atctcgaaggaagatattgacaggttaaacaagaaggtcagcactatactgaatgaggaa
ttcaagaacagcaaagactatgtccccaacaagagggactggctttcagcttactggact
gggttcaagtcaccagagcagatttcacgtatcagaaacactggtgtcaagccggagatt
ctaaaacgtgttggagaagccatgactactctgccagaaaatttcaagcctcacagggct
gtgaagaagatttttgatcagcggcgtcagatgattgagactggagaaggcattgattgg
gcagtgggtgaagcacttgcttttgctactcttatagttgaggggaaccatgtcaggtta
agtggtcaggatgttgagaggggtacattcagccaccgtcattctgtcatccatgaccag
gaaactggagagcggtactgcccgctcgacaatcttgttatgaaccaagatgaagagctt
tttactgtgagcaacagttccctgtcagaatttgctgttctgggctttgagttgggttac
tccatggagaacccaaactcactggtcctatgggaagctcagtttggtgattttgcaaat
ggagctcaagttatatttgatcagttcctgagtagtggggagtcaaaatggctccgccag
actggccttgtcgtgtgccttcctcatggatatgatggtcaggggcctgaacattctagt
gcaagactggagcgctttcttcagatgagtgatgacaacccttatgttatacccgagatg
gatccaacactgcggaagcaaatccagcagtgcaattggcaggttgtgaatgtaacgact
cctgcaaattacttccatgttctccgtcgccagatacaccgggacttccggaagcctttg
attgtgatgtccccaaagaacctccttcgccacaaggattgcaagtcgaatctatctgaa
tttgatgatcttgcgggccaccctggatttgacaagcaagggacacgcttcaagcggctc
ataaaggaccagaacaatcacaaggaccttgaggagggaatcaaccgtctagttctttgc
tctggaaaggtgtattatgaacttgatgaagaaagaaggaagacggagcgcactgatgtt
gccatatgtagagttgaacagctctgcccgttcccatacgacctcatccagcgggagttg
aagagatatccaaatgccgagatcgtgtggtgccaggaggagccgatgaacatgggtgcg
tacagctacattaacccccgcctgctgacggcgatgaaggcgctgggccggggtagcatc
gaggacatcaagtacgtgggcagggccccatcggcggccaccgcgacgggcttctactcg
gtgcacgtgcaggagcagacggagctggtgcagaaggcgctgcagcgcgaccccatcaac
tactcgttctga
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