KEGG   Panicum virgatum (switchgrass): 120685672
Entry
120685672         CDS       T07260                                 
Name
(RefSeq) endonuclease III homolog 1, chloroplastic-like isoform X1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120685672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120685672
Enzymes [BR:pvir01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     120685672
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     120685672
 Prokaryotic type
     120685672
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S Ogg-HhH DUF2400
Other DBs
NCBI-GeneID: 120685672
NCBI-ProteinID: XP_039823658
LinkDB
Position
8N:22257906..22268892
AA seq 368 aa
MPLALLLSRISQPAKMPSTRSAASARLVRASRADVNPVVQEVKRESSVSFDVSKPESTTS
VKRKRVKRELEVNGEPPKKQVGIVPDIEDFRYDRTKAVTSSSKATLSSVKVEGKLRVSSV
IKAKAPENWEAVLGGIKNMRLSGQAPVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKD
EVTHAAVERLSENGLLDPDAIVRIDEATLANLIKPVGFYQRKAQFIKEASKICLERFGGD
IPDSLNELLALRGVGPKMAHLVMSIAWKNTQGICVDTHVHRISNRLGWVFREGTKQKTTT
PEQTRMSLEKWLPKDEWEPINPLLVGFGQTICTPLRPKCDMCGINNLCPSAFKESSSPNP
KQKKTRSS
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcccctcgcactccttctctcccgcatttcccagccggccaaaatgcccagcacccgc
tccgccgcctccgccaggctggtccgcgcctcccgcgccgacgtcaacccagttgtacaa
gaagtgaaacgtgaatccagtgtttctttcgatgtttccaagcctgaatcaactacttct
gttaagaggaaaagggtgaagcgagagcttgaagtgaatggggagcctcctaagaagcag
gttggtattgtccctgacattgaggattttcgatatgacaggaccaaagcggttacatca
tcgagtaaggcaaccctgtcttcggtcaaggtggagggaaagctcagagtttcttcagtt
ataaaagctaaagctccagaaaactgggaggcagttcttgggggtattaaaaacatgagg
ttatctggccaagcccctgtagatacgaaaggctgtgaaaaagctggatctctccttccg
cccaaggaaagaagatttgcagttctgatatcaactatgatgtctagccaaactaaagat
gaagttacacatgctgctgtggaacgtctctctgaaaatggtttacttgatcctgatgct
atagtcaggattgatgaggctacgcttgcaaatcttatcaaacctgttggattctatcag
agaaaggctcaattcataaaagaagcttctaaaatttgcctcgaacgttttggaggtgat
attccagattctctgaacgagctgcttgctctgagaggagttggccctaaaatggctcat
ttggtgatgagcattgcttggaagaatactcaaggaatctgtgttgacactcatgtgcat
cgcatttctaaccgtcttggatgggttttccgggaaggaacaaaacagaaaacaacaact
ccggaacagacaagaatgtctctagagaagtggctacccaaggatgagtgggaacctata
aacccattactggttggttttgggcagactatctgcactccactgaggcccaagtgtgac
atgtgtggcatcaataacctttgcccttcagctttcaaggaatcttctagtccaaatcct
aagcaaaagaaaacgaggtcttcatag

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