Panicum virgatum (switchgrass): 120687997
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Entry
120687997 CDS
T07260
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 3-like
KO
K12192
charged multivesicular body protein 2B
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120687997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120687997
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120687997
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
120687997
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120687997
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
YlqD
DUF6779
GINT1_N
DUF722
Mus7
Motif
Other DBs
NCBI-GeneID:
120687997
NCBI-ProteinID:
XP_039826052
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Position
9N:23974585..23978728
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AA seq
260 aa
AA seq
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MITCRRYCQRTTKGAGQKKKHLHTRTRHCPRRGSSRRPRRRTHRGKSAMNPFAKKPTPRE
VMRSSKRDLTNATRGIERDIASLQQEEKKLVAEIKRTAKTGNEAATKILARQLIRLRQQI
SNLQGSRAQIQGIATHTQAMHANTSVATGLQSASKAMGALNKQMAPEKQMQIMKEFQKQS
AQMDMTNEMMSDSIDDVLDDDQAEEETEELANQVLDEIGVDIASQLSSAPKGKIAGKKVQ
VDESSELEELEKRLAALKNP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgattacttgcaggaggtactgccagcgaaccacgaaaggagccgggcaaaaaaaaaag
catctccacacgcgtacgcggcattgtcctcggcgcggttcctcccggcgaccacgaaga
cgaacacaccgaggcaagtcagcgatgaatcccttcgcgaagaagccaacgccgcgagag
gtgatgcggagcagcaagcgagacctgacgaatgctacgcgagggattgagagggatatc
gcatcattacaacaagaggagaagaagctagttgctgaaattaaaaggacagcaaaaact
ggcaatgaggcagcaacaaaaattctagcccgtcagctgatcaggttaaggcaacagatt
tctaatttgcaaggtagccgagctcagattcaggggattgcaacacatactcaggcaatg
catgccaacacttcagtggctactggtttacaaagtgcaagcaaagcaatgggagctctt
aataagcaaatggcacctgaaaagcagatgcaaataatgaaagaattccaaaagcagtca
gcacaaatggatatgacaaatgagatgatgtctgattcaattgatgatgttttagacgat
gatcaggctgaggaagaaactgaagaacttgctaatcaggttctggatgagattggtgtg
gacatcgcctcacagttgtcctcggctcctaaaggaaaaattgccggaaagaaggttcag
gttgatgaaagttcagagctggaggaactagagaaaaggctggctgcattaaaaaatcca
taa
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