KEGG   Panicum virgatum (switchgrass): 120689688
Entry
120689688         CDS       T07260                                 
Name
(RefSeq) 15-cis-phytoene desaturase, chloroplastic/chromoplastic
  KO
K02293  15-cis-phytoene desaturase [EC:1.3.5.5]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00906  Carotenoid biosynthesis
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
Module
pvir_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    120689688
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.5  15-cis-phytoene desaturase
     120689688
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 DAO Pyr_redox_2 Pyr_redox FAD_binding_2 FAD_binding_3 FAD_oxidored Thi4 HI0933_like Lycopene_cycl MurD-like_N UDPG_MGDP_dh_N DUF3562
Other DBs
NCBI-GeneID: 120689688
NCBI-ProteinID: XP_039827990
LinkDB
Position
9N:complement(76629714..76635560)
AA seq 571 aa
MDTGCLSSMKITGVSQARSFAGKLPTQRCFASSHLASFAVKSLILRNKGRSSHRRHSALQ
IVCKDFPRPPLESTINYLEAGQLSSFFRNSERPSKPLQVVIAGAGLAGLSTAKYLADAGH
KPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGIEDRLQWKEHSM
IFAMPNKPGEFSRFDFPETLPAPVNGIWAILKNNEMLTWPEKVKFAIGLLPAMLGGQPYV
EAQDVLTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGS
KMAFLDGNPPERLCMPIVDHIRSRGGEVRLNSRLKKIELNPDGTVKYFALTDGTQITGDA
YVCAAPVDIFKLLVPQEWSEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSL
LSVYADMSVTCKEYYDPNRSMLELVFAPAEEWIGRSDAEIIDATMEELAKLFPDEIAADL
SKAKILKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSG
KLCAQSIVQDYSRLSLRSQKSLQSEEVPVAS
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggatactggctgtttatcatctatgaagattactggagtgagccaagcaagatctttt
gcgggaaaacttcctacccagagatgctttgcaagtagtcaccttgcaagctttgctgtg
aaatctcttatcttgaggaataaaggaagaagctcacaccgtagacattctgctttgcag
attgtctgcaaggattttccaagacctccgctagaaagcacaataaactatttggaagct
ggacagctctcttcattttttaggaacagcgaacgccccagtaaacccttacaggtcgtg
attgctggtgcaggattagctggtctttcaacagcaaaatatctggcagatgctggccat
aaacccatattgcttgaggcaagagatgttttgggtggaaaggtagctgcttggaaggat
gaagatggagattggtacgagaccgggcttcatatcttttttggagcttatcccaacata
cagaatttatttggcgagcttggtattgaggaccgtttgcaatggaaagaacactccatg
atatttgccatgccgaataaaccaggagaattcagccggtttgatttcccagaaactttg
ccagcacctgtaaatggaatatgggccatactgaaaaataatgaaatgcttacctggcct
gagaaggtgaagtttgctattggacttctgccagcaatgcttggtggtcaaccttatgtt
gaagctcaagatgtcttgacagtttcagagtggatgaaaaagcagggtgttcctgatcga
gtgaatgatgaggtttttattgcgatgtccaaggcactgaatttcataaatcctgatgaa
ctatccatgcagtgcattttgattgctttgaaccgatttcttcaggaaaagcatggttcc
aaaatggcattcttggatggcaatccacctgaaagactatgtatgcctattgttgatcac
attcggtctaggggtggtgaggtccgcctgaattctcgtcttaaaaagatagagctgaat
cctgatggaactgtgaaatattttgcacttactgatggaactcaaataactggagatgct
tatgtttgtgcagcaccagttgatatcttcaagcttcttgtacctcaagagtggagtgaa
atttcttatttcaagaagctggagaagttggtgggagttcctgttatcaatgttcatata
tggtttgacagaaagctgaaaaacacatatgaccaccttcttttcagcaggagttcactt
ttaagtgtctatgcagacatgtcggtaacctgcaaggagtactatgatccaaaccgttca
atgctggagttggtctttgctcctgctgaggaatggattggtcgaagtgacgctgaaatc
attgatgcaactatggaagagctagccaagttatttcctgatgaaattgctgctgatctg
agtaaagcaaaaattcttaagtatcatgtggtgaagacaccgagatcggtttacaaaacg
gtcccaaactgtgaaccttgccgacctctccaaaggtcacctatcgaagggttctatctg
gctggcgattacaccaagcagaaatacttggcttccatggaaggtgcagttttatccggg
aagctttgtgcccagtctatagtgcaggattatagcaggctctccctcaggagccagaaa
agcctgcaatctgaagaagttccggtcgcatcttag

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