Panicum virgatum (switchgrass): 120690820
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Entry
120690820 CDS
T07260
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase-like isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00280
Valine, leucine and isoleucine degradation
pvir00650
Butanoate metabolism
pvir00900
Terpenoid backbone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120690820
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120690820
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120690820
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
120690820
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GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
120690820
NCBI-ProteinID:
XP_039829586
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Position
9N:complement(81327516..81338906)
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AA seq
468 aa
AA seq
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MAMAMAAEAKDVGILAMDIYFPPTCVLQEELETHDGVSKGKYTIGLGQDSMAFCTEVEDV
ISMSLTVVKSLLKNYNIDPKCIGRLEVGSETVIDKSKSIKTWLMQIFEECGNTDIEGVDS
SNACYGGTAALFNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNA
PISFESKYRGSHMAHAYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYNVFCKKYEKHER
KQFSIFDADYVVFHSPYNKLVQKSFARLCYNDFLRNCSTVDEESREKLAPYTGLSSEESY
QSRDLEKASQQVAKKLYESKVQPTTLIPKQVGNMYTASLYAAFASVIYNRHETLAGQRIV
MFSYGSGLTSTMFSFKINEGQHPFSLLNIANILDISKKLEARHVVPPKKFIETLKLMEHR
YGAKDFVTSQDTSLLPAGTYYLTHVDSMYRRFYAVKDDAVTTAVSNGH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgatggcggcggaggccaaggacgtcggcatcctcgccatggacatctac
ttcccgcccacctgcgtgctccaggaagagttggaaactcacgatggcgtgagcaaaggg
aaatacaccattgggcttgggcaggatagcatggcattttgcactgaagttgaggatgtt
atttcaatgagcttgacagtggtgaagtccctactgaaaaattataacattgacccgaag
tgcattggacgtttggaagttggcagtgaaacagtaatagacaagagcaagtctataaag
acatggttgatgcaaatttttgaggaatgtggcaacactgatattgaaggagttgactcc
tcaaatgcatgctatggtggaacagctgcgttgtttaattgtgttaactgggttgaaagc
aactcgtgggatgggcgctatggacttgttgtttgcacagacagtgcggtttatgctgaa
ggtccggctcgtcctactggtggtgcagctgctattgcaatgttgattggaccaaacgct
cctatttcttttgaaagcaaatataggggatctcacatggcccatgcatatgacttttac
aagcctgatcttgcaagtgaatatccggtggttgatggaaagttgtcgcagacatgctat
ctcatggcattggattcctgctataatgtattttgtaaaaagtatgaaaagcatgagaga
aagcaattttcaatttttgatgcagattatgttgtatttcattctccatacaacaagctt
gtacagaaaagctttgctcgtttgtgctacaacgatttcttgagaaactgcagcacggtt
gatgaagagtctagggaaaaattggcaccctatactggtttgtcatctgaagaaagctac
cagagccgagaccttgaaaaggcatcccagcaagttgcgaagaaactgtacgagtccaag
gttcagccaacaacattgatcccaaaacaagttgggaatatgtatacagcatcactctat
gccgcttttgcttcagttatctataatagacatgaaactctggcaggccagaggattgtt
atgttttcatatggaagtggcttgacatcaacaatgttctctttcaaaattaatgaaggc
cagcatccattcagtctgctaaacattgcaaacatactggatatttccaagaaactggag
gcacgacatgtggttcccccgaagaaatttatcgagacactgaaattgatggagcaccgc
tatggggcaaaagatttcgtgaccagtcaggacacaagtttgctacctgcaggcacatat
tatctcacccacgtcgactccatgtaccgaaggttctacgccgtgaaagatgacgctgtc
accactgcagtgtccaatggccactga
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