Panicum virgatum (switchgrass): 120693127
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Entry
120693127 CDS
T07260
Name
(RefSeq) putative linoleate 9S-lipoxygenase 3 isoform X1
KO
K15718
linoleate 9S-lipoxygenase [EC:
1.13.11.58
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00591
Linoleic acid metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00591 Linoleic acid metabolism
120693127
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.58 linoleate 9S-lipoxygenase
120693127
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Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
120693127
NCBI-ProteinID:
XP_039832464
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All DBs
Position
9N:complement(11746890..11751812)
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AA seq
893 aa
AA seq
DB search
MLSGIIDGLTGASKNARLKGTVVLMRKNVLDLNDFGATVIDGISEFLGKGVTCQLISSTL
VDPVQSTRCCPAREQSKRRHTIAAQRSSTQKNNGNRGKVGAEANLEQWLTSLPSLTADGE
SKFGVTFDWEVEKLGVPGAVIVKNNHAAEFFLKTVTLDDVPGRGTVTFVANSWVYPVAKY
RYDRVFFSNDTYLPSQMPVALKPYRDDELRNLRGDDQQGPYEEHDRVYRYDVYNDLGEPD
RGNPRPVLGGSADHPYPRRCRTGRKPASTDPNSESRLSLVEQIYVPRDERFGHRKMSDFL
GYSIKAISQGIVPAVRTYVDTTPGEFDSFQDILNLYEGGIKLPKIQALEDMRKLFPLQLV
KDLLPAGGDYLLKLPIPQIIKEDKNAWRTDEEFAREVLAGVNPMMITRLTEFPPKSTLDP
SKYGDQTSTITAEHIEKGLEGLTVQQALDGNRLFILDHHDRFMPFLIDVNNLEGNFIYAT
RTLFFLRGDGRLAPLAIELSEPYIDGALTKAKSKVYTPASSGVEAWVWQLAKAYVAVNDS
GWHQLISHWLNTHAVMEPFVIATNRQLSVTHPVHKLLHPHYRDTMTINALARQTLINGGG
IFEMTVFPGKYALAMSSAVYKGWNFTEQGLPADIVKRGVAVADPSSPGKVRLLIEDYPYA
SDGLAVWHAIEQWVGEYLAIYYPDDATLRGDEELQAWWKEVREIGHGDLKDAPWWPRMQA
VPELAGACATIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRRMPEPGTEAYAELESDPE
RGFIRTITSQIQTLIGISLIEVLSTHSSDEVYLGQRDTPAWTSDTRALAAFKRFSDALVE
IEGKVVGANRDPQLKNRSGPAEFPYTLLYPNTSDRTGAAAGITAKGIPNSISI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcgggatcatcgacgggctgacgggggcgagcaagaatgcgcggctcaagggc
acggtggtgctcatgcgcaagaacgtgctcgacctcaacgacttcggcgccaccgtcatc
gacggcatcagcgagttcctcggcaagggggtcacctgccagctcatcagctctaccctc
gtcgaccccgtgcagagcaccagatgctgcccagctcgtgaacaaagtaaaagaagacac
acaatagcagctcaaagatcaagcactcagaaaaacaacggcaaccgcggcaaggtgggc
gccgaggcgaacctggagcagtggctgacgagcctgccgtcgctgacggccgacggcgag
tccaagttcggcgtgaccttcgactgggaggtggagaagctgggcgtgccgggcgccgtc
atcgtcaagaacaaccacgccgccgagttcttcctcaagaccgtcaccctcgacgacgtg
ccggggcgcggcacggtgaccttcgtcgccaactcctgggtctaccccgtcgccaagtac
cgctacgaccgcgtcttcttctccaacgatacgtacctgccgagccagatgccggtggcg
ctgaagccctaccgcgacgacgagctccgcaacctccgcggcgacgaccagcagggcccc
tacgaggagcacgaccgcgtctaccgctacgacgtctacaacgacctcggcgagcccgac
cgcggcaacccgcgccccgtcctgggcggctccgccgaccacccctacccgcgccgctgc
cgcaccggccgcaagcccgccagcaccgaccccaactcggagagccggctgtcgctggtg
gagcagatctacgtgccccgcgacgagcgcttcggccaccgcaagatgtcggacttcctg
gggtactcgatcaaggccatctcgcaggggatcgtgccggcggtgcgcacgtacgtggac
accacccccggcgagttcgactccttccaggacatcctcaacctctacgagggcggcatc
aagctgcccaagatccaggcgctcgaggacatgcgcaagctcttcccgctccagctcgtc
aaggacctcctccccgccggcggcgactacctcctcaagctccccatcccgcagatcatc
aaagaggacaagaatgcgtggaggaccgacgaggagttcgcgcgggaggtgctcgccggc
gtcaacccgatgatgatcacgcgcctcacggagttcccgcccaagagcacgctcgacccc
agcaagtacggcgaccagacgagcaccatcacggcggagcacatcgagaagggcctcgag
ggcctcacggtgcagcaggcgctggacggcaacaggctcttcatcctggaccaccacgac
cggttcatgccgttcctgatcgacgtcaacaacctggagggcaacttcatctacgccacc
cggacgctcttcttcctgcgcggcgacggcaggctggccccgctcgccatcgagctcagc
gagccgtacattgacggcgccctgaccaaggccaagagcaaggtctacacgccggcgtcc
agcggcgtcgaggcctgggtgtggcagctcgccaaggcctacgtcgccgtcaacgactcc
ggctggcaccagctcatcagccactggctgaacacgcacgcggtgatggagccgttcgtg
atcgcgacgaaccggcagctgagcgtgacgcacccggtgcacaagctcctgcacccgcac
taccgcgacacgatgaccatcaacgcgctggcgcggcagacgctcatcaacggcggcggc
atcttcgagatgaccgtgttcccgggcaagtacgcgctggccatgtcctcggcggtgtac
aagggctggaacttcaccgagcagggcctgcccgcggacattgtcaagcggggcgtggcg
gtggcggacccgtcgagccccggcaaggtgcggctgctgatcgaggactacccgtacgcg
agcgacgggctggccgtctggcacgcgatcgagcagtgggtgggcgagtacctggccatc
tactaccccgacgacgccacgctgcggggcgacgaggagctgcaggcgtggtggaaggag
gtgcgcgagatcgggcacggcgacctcaaggacgcgccctggtggccccggatgcaggcc
gtgccggagctcgccggcgcctgcgccaccatcatctggatcgcgtcggcgctgcacgcg
gccgtgaacttcgggcagtacccgtacgcggggtacctcccgaaccggccgacggtgagc
cggcggcggatgccggagcccggcacggaggcgtacgcggagctggagagcgacccggag
cggggtttcatccgcaccatcaccagccagatccagaccctcatcggcatctcgctcatc
gaggtcctctccacgcactcctccgacgaggtgtacctcggccagcgcgacaccccggcg
tggacctccgacacccgggcgctcgcggcgttcaagcggttcagcgacgcgctggtggag
atcgagggcaaggtggtgggcgccaaccgcgacccgcagctcaagaaccggagcgggccc
gccgagttcccctacacgctgctgtaccccaacacctccgaccgcacgggcgccgccgcc
gggatcaccgccaagggcatccctaacagcatctccatctga
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