KEGG   Panicum virgatum (switchgrass): 120694561
Entry
120694561         CDS       T07260                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RKP-like
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120694561
Enzymes [BR:pvir01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120694561
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120694561
  Multi subunit type E3
   KPC complex
    120694561
SSDB
Motif
Pfam: RKP_N SPRY zf-C3HC4_3 Ufd2P_core zf-RING_2
Other DBs
NCBI-GeneID: 120694561
NCBI-ProteinID: XP_039833660
LinkDB
Position
2K:64768537..64775537
AA seq 1272 aa
MAEGSCSHRRSAFSPGLAVLLSGEEAKISPQKTHLVSYHDEIGHQAVERTIEHILDFPHK
SVVRPPGPIDAVFVRSVLRNQARKLDFDWDKCIHGYHGSVLIVDKGAGQSKVVLDDSSIC
GKFRSVRGPLLVESSAPFSSARANACVWKGKWMYEVTLETSGVQQLGWATLSCPFTDQKG
VGDADDSYSFDGWRVTKWNNDPKPYGQPWAVGDVIGCCINLDAGEISFYRNGTSLGVAFD
GIRSVEPSKGYYAAISLSEGERCHLNFGSHPFRYPVDGFEPMEAPPHSWTYTTYLLRCLF
RLLEVQNLEKSESAYFEKLRRVKKFAPLQELFRPISEAICAEFFSAIEMSQGCLEYIAWG
SLTNFVLDVFRAREPHDFSCLDQVLDLFLQFPGCSSLLQELIVALSCMCKAAPLVLTECP
YSGSYPFLALVCHLLRHKDVMLLWWNSEDFAFIFEGFLTRKIPNKHDLQCLVPSVWWPGS
SEDEVSMTLSMTTLSDAIKKIEEMHRELCSLVICFIPPVSPPQPPGSVFRSFVQGSVLKA
RGGDHRMVVNGTYNNTVLVSLYTVILHLLSEGFSIDSSGSASSSKVNCGNGVGFLHKGGK
RKFPTQLLFRNDAYYSVIPRIGGSPSILMHHQFDDVEDEVQWDEGCMNDEETRVTHTTVQ
KPCCCSVTDASIGLRYKESAKYVPSTSKVPCKPMPERTAHVAAECSGRSLSDEIEDKPST
STQSEIEYGYQALHNLESMPMTTQSSSEALKEEELLDLMLLLYHLGISPNFRQAFYFMSQ
QSQSISLLEETDRQIREKSCAEQVRRLKEARNSYHEDLVDCVRHCVWYRATLFSPWKQRG
MYATCMWVVELLLVLSDSKTIFQYVPEFYVESLVDCFHALRRSDPPFVSPAVFLKQGLAS
FVTLVVKHFDDARIVNPDLKDLLLQSISVLVQYKEFMLVFENNREAINRMPRSLLSAFDN
RSWIPVSNILFLLCKGSGFASSKNGESSSSAIFQVILRETCIHEEELFFSFLNRLFNTLS
WTMTEFSMSIREMQDKHQVADLQQRKCSVIFDVSCNLARILEFCTREIPCAFLMGPDMNL
RRLTELVVFILNHIISAADAEFFDMTLRRPGQHQDKTNRTMILAPLVGIILNLMECSSTS
EHRELNDVIAVFASMDCPATIHFGLQYLLSYNWSNVLRGDASLAKLAQLEEFSHYFRRIT
VAVDGVEDRSLNTGDEEEDDTCCICYNCDSDATFQPCHHRSCFGCISRHLLNSQRCFFCN
AVVTSVTRIADS
NT seq 3819 nt   +upstreamnt  +downstreamnt
atggcagaaggaagctgtagccataggaggagtgctttctcccctgggctagctgtgtta
ttgtctggcgaggaagctaagattagcccccagaagacgcacttggtttcctatcatgac
gagattgggcaccaggctgtcgagaggactatagagcacattcttgatttccctcacaag
tcagtggtccggcctcctggaccaattgatgcggtcttcgtgcgctcagtgttgaggaat
caggctagaaaattagattttgactgggacaaatgtatccatggataccatggtagcgtc
ttgattgtagacaaaggtgctgggcagagcaaggtggttcttgacgattcaagcatttgc
ggtaagttcaggagtgtcaggggaccgttacttgttgagagttctgccccattcagcagt
gctagggctaatgcctgtgtgtggaagggcaagtggatgtatgaggtgaccctagagact
tctggagttcagcagcttggatgggctactctctcttgtccttttactgatcagaaaggt
gttggtgatgctgatgattcatattcatttgatggctggagggtgactaagtggaacaat
gacccaaagccatatggccagccatgggcagtaggggatgtgatcggttgctgcatcaac
ttagatgcaggagagatctccttttacaggaatgggacatctcttggtgttgcatttgat
ggaattcgcagtgtggaaccaagcaagggctactatgcagcaatctccctctcagaaggt
gagcgttgccatctgaacttcggctcacatccattccggtatcctgttgatgggttcgaa
ccaatggaggcgccaccacactcttggacatatacgacatatcttcttagatgtttgttc
cgattgctagaagttcaaaatctggagaaatctgaatcagcatactttgagaaactgagg
agggtaaaaaaatttgcaccactacaagaactttttcgaccaatttcagaagcgatctgt
gcagaatttttcagtgctattgaaatgagccaagggtgccttgagtatattgcctggggc
tcattgaccaattttgtcttagatgttttcagggcacgcgagccacatgatttctcatgc
cttgatcaggttctcgaccttttccttcagttcccaggttgcagctcattattgcaggag
ctcattgtggcactttcttgcatgtgcaaagctgcaccacttgtgctgacagaatgccca
tattctgggtcgtatccatttttagcgctggtttgccaccttcttaggcataaggatgta
atgcttctatggtggaactcagaagattttgcattcatatttgaagggtttcttacaaga
aagataccaaataagcatgatttacagtgtctcgtaccatctgtttggtggcctgggtct
tctgaggatgaggttagcatgacactgtcgatgacaacactctcagatgcaatcaagaag
attgaggagatgcatcgtgagctttgcagcttggtaatatgctttattccaccagtttct
cccccccagcctccaggctctgtatttaggtccttcgtacaaggttcggtactgaaagct
agaggtggagatcataggatggttgtcaatgggacttacaacaatactgtgcttgtttca
ttgtacaccgtaatcctccatttgttgtctgaaggattttccatagattcttctgggtcc
gcatcatcctctaaagtgaactgtgggaatggggttggatttcttcacaaaggtggaaag
cggaagtttccgacacaattacttttcaggaatgatgcctattatagcgtaattcctaga
atcggtggatcaccaagtattttgatgcatcaccaatttgatgatgtggaagatgaagtg
cagtgggatgaaggctgcatgaatgatgaggagacgcgtgtaacacacactacagtacag
aagccttgttgctgctcagtcacagatgccagtattggcctaagatacaaggaaagtgct
aagtatgtaccatcaacttcaaaagtcccatgtaagcccatgcctgaaagaactgctcat
gttgctgctgagtgcagtgggagaagtctgagtgatgagatcgaagacaagcctagcaca
agtactcaatcagaaattgaatatggataccaagcactgcataatcttgaaagcatgcca
atgacaactcaatcttcatcagaagcacttaaagaggaagagctgcttgatcttatgtta
ttattatatcatctgggcatctcaccaaattttaggcaggcgttttatttcatgtctcag
cagtcacagtccatttctttactagaagaaactgacaggcaaatacgagaaaaatcatgc
gcagagcaagtaaggcgtttgaaagaagccaggaatagctatcatgaggatttggtggat
tgtgtacgccattgtgtttggtaccgggctactcttttctctccatggaaacaaagggga
atgtatgcaacttgcatgtgggttgtggagcttcttttggtccttagtgactcaaaaacc
attttccagtatgttcctgagttctatgtggaatcactggttgattgtttccatgccctg
cgaaggagtgaccctccttttgtttcacctgcagtattcctcaaacaagggctggcatca
tttgtcactctggttgtcaagcactttgacgatgcgaggatagtgaatccagacttgaaa
gatcttcttcttcaatcaatttcggtccttgtgcagtacaaagaattcatgcttgttttc
gagaacaatcgggaggctataaatagaatgccaagatcacttttatcagcttttgacaac
agatcatggattcctgtttctaacatacttttcctgctttgcaaaggctccggctttgca
tcctctaagaatggtgaatcttcatcatctgcaatttttcaggttatacttagggagaca
tgcattcatgaagaagaactgttcttttccttcctcaatcgacttttcaatacactcagc
tggacaatgaccgagttctccatgtccatccgagagatgcaagataaacaccaggttgct
gatctgcagcaaaggaagtgcagtgtaatttttgatgtatcatgtaatcttgcaaggatc
ttggaattctgtacccgagagattccttgtgcattcctcatgggaccagatatgaatttg
cggaggttgactgaattggttgtctttattctcaaccacatcatatcagcagctgatgca
gagttctttgacatgacgctaagacggccagggcagcatcaagataaaacaaatcgtact
atgatcttggctcctcttgtaggcattatcctcaatctcatggaatgcagcagcacatca
gaacatagggagctaaatgatgtgattgcagtgtttgcaagcatggattgccctgctaca
atccattttgggttgcagtacctactgagctacaactggagcaatgttctccgaggggat
gcctcccttgcaaagctagcacagcttgaagagttctctcattacttccggcgcattaca
gtggctgtagatggtgtagaagatcgtagcctaaacacaggtgacgaggaagaagatgac
acctgttgcatttgctacaactgtgattcggatgcaacattccagccatgccatcaccgg
tcctgctttggctgcattagcaggcatctcttgaacagccagaggtgcttcttctgcaat
gctgtagtaacatcggttacaaggatagccgattcatga

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