Panicum virgatum (switchgrass): 120702243
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Entry
120702243 CDS
T07260
Name
(RefSeq) homogentisate geranylgeranyltransferase-like
KO
K09833
homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:
2.5.1.115
2.5.1.116
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00130
Ubiquinone and other terpenoid-quinone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
120702243
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvir01006
]
120702243
Enzymes [BR:
pvir01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.115 homogentisate phytyltransferase
120702243
2.5.1.116 homogentisate geranylgeranyltransferase
120702243
Prenyltransferases [BR:
pvir01006
]
Compound prenylation
HGA prenyltransferase
120702243
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Gene cluster
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Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
120702243
NCBI-ProteinID:
XP_039841899
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Position
4K:complement(41177936..41183619)
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AA seq
354 aa
AA seq
DB search
MGYVFYQFLVFDSGVVRRRSWEEEAGVFVPPERLGSTHPQHNFNIDQFEEIGIEVTKKLR
AFYWFCRPHTIIGTILGITSVSLLPMKSLDDLSVTVLLGFLEALASAVCMNIYVVGLNQL
FDIEIDKVNKPTLPLASGEFSVTTGVSLVGAFLVMSISIGIRSKSAPLMCALLVSFLLGS
AYSIDLPLLRWKRHPFLAASCILVVRAILVQLAFFTHMQQHVLKRPFAPTRSVVFATLFM
CCFSAVIALFKDIPDVDGDRDFGIQSLSVRLGQQKVYRLCINMLMTAYTAAILVGASSPN
LYQKITTVFGHGLLAFVLWHRARQFDIANKTCITPFYMFIWKLFYAEYLVIPFM
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggggtacgtcttctaccagttcctcgtcttcgattccggtgtcgtgcggcggcggtcc
tgggaggaggaagctggtgtttttgtccctccagagcggcttggatctactcatcctcaa
cataatttcaatatcgatcagtttgaggaaattggcatagaagtcacgaagaaactgaga
gctttctactggttttgtcggccccacacaatcattggcactatactaggcattacttca
gtgtccctcctaccaatgaagagcctagacgatttaagcgtgacagttctattgggattt
cttgaggctttagcctccgctgtatgcatgaatatttatgtagtagggctcaatcagctg
tttgacattgaaattgacaaggtcaataagccaactctcccattggcttctggagagttt
tcagtgacaactggagtatcattagttggggcattcttggtcatgagcattagcattgga
ataagatccaaatctgctccattgatgtgtgccttgcttgtcagcttccttcttggaagt
gcctactctatagatcttccattgctcaggtggaagcgacatccctttctcgctgcatcc
tgcatacttgttgtgagggctatattggttcaattagcattctttacacacatgcagcaa
catgttctgaagaggcccttcgcgccaacaaggtcggtggtgtttgcaacattgtttatg
tgttgtttctctgcagtaatagctctattcaaggatatccctgatgttgatggagataga
gatttcggcattcaatctttgagtgtacggttaggtcaacagaaagtgtataggctctgc
attaatatgctcatgacagcatatacagctgcaattttggtaggagcatcatctccaaat
ctgtatcaaaagattaccactgtgtttggccatggcttgctcgcttttgtgctttggcac
agagcacgacaatttgacatcgcaaataagacatgcatcacaccattttacatgttcatt
tggaagttattctacgccgagtatttagtcataccatttatgtag
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