Panicum virgatum (switchgrass): 120702315
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Entry
120702315 CDS
T07260
Name
(RefSeq) homogentisate 1,2-dioxygenase-like
KO
K00451
homogentisate 1,2-dioxygenase [EC:
1.13.11.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00350
Tyrosine metabolism
pvir01100
Metabolic pathways
Module
pvir_M00044
Tyrosine degradation, tyrosine => homogentisate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
120702315
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.5 homogentisate 1,2-dioxygenase
120702315
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GFIT
Motif
Pfam:
HgmA_N
HgmA_C
Motif
Other DBs
NCBI-GeneID:
120702315
NCBI-ProteinID:
XP_039841976
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Position
4K:complement(220979..223760)
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AA seq
460 aa
AA seq
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MAAQQQQQQELRYLSGLGNTFSSEAVPGSLPVGQNSPLVCPRGLYAEQLSGTSFTTPRAQ
NLRTWLYRIKPSVTHEPFHPRSPAHARLVGEFDRSTAAATPTQLRWRPPEVPLDPPLDFI
DGLYTVCGAGSSFLRHGYAVHMYAASKSMDGCAFCNADGDFLIVPQQGRLLITTECGKML
VSPGEIVVIPQGFRFAIDLPDGPSRGYVSEIFGTHFQLPDLGPIGANGLASPRDFLSPTA
WFEQVHRPGYTIVHKYGGELFTATQDFSPFNVVAWHGNYVPYKYDLSRFCPFNTVLFDHG
DPSVNTVLTAPTDKPGVALLDFVIFPPRWLVAENTFRPPYYHRNCMSEFMGLIYGIYEAK
ADGFLPGGASLHSCMTPHGPDTKTYEATISRADANEPFRLSGTLAFMFESSLIPRVCRWA
LDSPCRDLDYYQCWIGLKSHFSHDTGATASEPAASADEKD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcagcagcagcagcagcaggagctgcgctacctctccgggctgggcaacacc
ttctcgtcggaggcggtgccggggtctctccccgtcggccagaacagcccgctggtgtgc
ccgcggggcctctacgccgagcagctctccggcacctccttcaccaccccgcgggcccag
aacctgcgcacgtggctctaccggatcaagccatcggtgacccacgagcccttccacccc
cgcagccccgcccacgcccgcctcgtcggggagttcgaccgctccaccgccgccgccacg
cccacgcagctgcgctggaggccgcccgaggtgcccctggacccgcccctcgacttcatc
gacggcctctacaccgtctgcggcgccgggagctccttcctccggcacggatacgccgtc
cacatgtacgctgctagcaagtccatggacggatgcgccttctgcaacgcggatggtgat
ttcctcattgttccccagcaaggaaggttgttgatcacaaccgaatgtggaaagatgcta
gtttcacctggcgaaattgttgtgattcctcaaggcttccgctttgccatcgacttgcct
gatggcccctcacgaggctatgtttctgagattttcggcacccactttcagctccctgat
cttggcccaatcggtgccaatggtttggcttcaccaagggatttcctttcccccacagca
tggttcgagcaggtccaccgccctggatacacaatagtgcacaagtatggtggtgaacta
ttcactgccacgcaggatttttctccgttcaatgtggttgcatggcatgggaattatgtc
ccatacaagtatgatttgagtaggttctgcccatttaatacggtcctatttgatcatggt
gatccttcagtcaacacagtccttactgcgccaactgataagcctggcgtcgcattactt
gactttgtaatattcccaccaaggtggttggttgctgaaaatacgttccgtcctccatac
taccatcgcaactgcatgagtgagttcatgggcctgatttatgggatatacgaggccaag
gctgatggttttctccccggaggtgctagccttcacagctgcatgacaccacatggacca
gacaccaagacatacgaagcgacgatcagccgtgctgatgccaatgagccattcaggctc
agcggtacgttggcgttcatgttcgagtcttcgctcatccctcgtgtgtgcaggtgggct
cttgattcgccgtgccgagaccttgattactaccaatgctggattggattgaagtcgcac
ttctcacatgacactggagccacagcgagcgagcctgctgcaagtgcggatgagaaagat
tag
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