Panicum virgatum (switchgrass): 120703002
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Entry
120703002 CDS
T07260
Name
(RefSeq) alpha-mannosidase 2-like
KO
K01231
alpha-mannosidase II [EC:
3.2.1.114
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00510
N-Glycan biosynthesis
pvir00513
Various types of N-glycan biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120703002
00513 Various types of N-glycan biosynthesis
120703002
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.114 mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase
120703002
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
120703002
NCBI-ProteinID:
XP_039842944
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Position
4K:9847914..9856927
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AA seq
1184 aa
AA seq
DB search
MPFFSGGGGGRSGALLPTTSKPKAHHHLRSKSSLSAPASSRRRGGAHPASSPYSRRALCL
AAAAFAALFVLAFLRLGFPSSSRPAARAPHARPRARLTRRPAFRLRDSAAAEAAAAAVAA
RIGREAPVDITTRDLYDRIQFLDADGGAWKQGWEVKYRGDEWDGEKLKVFVAPHSHNDPG
WIRTVEEYYDRQSRHILDTIVESLSKDSRRKFIWEEMSYLERWWRDAPRKKQEAFAKLVR
DGQLEIVSGGWVMNDEANSHYFAIIEQMMEGNMWLNDTIGVVPKNSWSIDPFGYSSTMAY
LLRRMGFHNMLIQRTHYELKKELAMKKNLEYLWRQNWDIEETTDIFVHMMPFYSYDIPHT
CGPEPAICCQFDFARMRGFSYESCPWRFDPVETDADNVQERATKLLDQYKKKSTLYRTNT
LLIPLGDDFRYVSVDEAEVQFRNYEKLFDYINSNPHLNAEVKFGTLEDYFSTLRDEAEKI
NYSRPGELGSAELQGFPTLSGDFFTYADRNQDYWSGYYVSRPFFKAVDRVLEQMLRASEI
LGSFVLGYCQKFQCAKLPISFSHKLTAARRNLALFQHHDGVTGTAKDHVVVDYGTRMHTS
LQDLQLFMSRAVEVLLGDFHDRSDPTLLSHFETVQERSKYDVQPVHRVLDPHEGKAQSIV
FFNPLEQTRDEIVMVVVSTLDVSVLNSNGSCLQSQVSPEWKFVSDEKISTGRHRLYWRAS
VPALGLETYYVVTGQDCEKAIPAVVKTFTASQQFPCPEPYVCSKLEGKTVEMKNSYYTLS
FDVSHGLLQTVTGHKDGEQIVIGEEIGMYRSHGSGAYLFKPIGEAHSIVEEGGHFILTEG
PLVQEAHSLPKTEWHKSPLSHSTRIYDCGDSIQDMLIEKEYHVELVGHVFNDKELIVRYK
TNIDNQRIFYSDLNGFQMSRRQTYDKIPLQGNYYPMPSLAFLQDSLGTRFSVHSKQSLGA
ASLKNGWLEIMLDRRLVQDDGRGLGQGVMDNRPMNVIFHLLRESNVSALPKTHSLLTLQP
SLLSHRVGAHLNYPMHAFMSKKPHEKSFKLPQQSFTPLTASLPCDVHIVNLKVPQPLRFP
HAEAASQRFAILLQRRGWDSSYCKRGGLHCTTVGEEPVNLFYMFKDLSAVNVKATSLNLL
HDDPEMLGYLEQIGDVAQEGNVLISPMEIQAYKLDLQLPSLQEE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcttctccggcggcggtgggggccgctccggcgcgctcctccccaccacctcc
aagcccaaggcgcaccaccacctccgctccaagtcctccctctccgcgcccgcctcctcc
cgccgccgcgggggggcccaccccgcctcctccccctactcccgccgcgccctctgcctc
gccgcggccgccttcgccgcgctcttcgtcctcgccttcctccgcctcggcttcccctcc
tcctcccgccccgccgcgcgcgcgccccacgcccgcccccgcgcgcgcctcacccgcagg
ccggccttccgcctccgcgactcggccgccgcagaggccgcggcggccgccgtcgccgcg
cggatcgggcgtgaggcgcccgtcgacatcaccacgagggacctctacgaccggatccag
ttcctcgacgccgacggcggcgcgtggaagcaggggtgggaggtcaagtaccgcggcgac
gagtgggacggggagaagctcaaggtcttcgtcgcgccgcactcgcacaacgaccccggc
tggatccgcaccgtcgaggagtactacgaccgtcagtcgcgccacatcctagacaccatc
gtcgagtccctctccaaggattcgcgaaggaagttcatatgggaggagatgtcgtacttg
gagaggtggtggcgcgacgccccgcggaagaagcaggaggcgttcgctaagcttgtccgt
gacgggcagcttgagatcgtcagcggcggctgggtcatgaatgatgaggcaaactcccac
tactttgccatcatagaacagatgatggaggggaacatgtggctcaatgatactattgga
gttgttcctaaaaattcttggtcaatcgacccatttggttattcatctacaatggcttat
ttgcttaggagaatgggtttccataacatgttaatccagagaacgcactatgagctgaaa
aaggagcttgcaatgaaaaagaatcttgaatatttgtggaggcagaactgggatattgaa
gaaacaactgacatctttgttcatatgatgcccttctattcttatgatattccacataca
tgtggacctgaaccagctatctgctgccagtttgattttgctcgaatgcgtggtttcagc
tatgaatcctgcccatggagattcgatcctgttgagacagatgctgacaatgtgcaagag
agagcaacgaaacttctagatcagtacaagaaaaagtcaaccctgtacagaacgaataca
cttctcattcctttgggtgatgatttccgatatgttagtgtggatgaagcagaagtacaa
ttccgtaattacgagaagctttttgattacataaactctaatccccatcttaatgctgaa
gtcaaatttggtaccctggaggattacttctccacactgagagatgaagctgaaaagata
aactattcacgcccaggtgaattgggttctgctgagttgcaaggttttccaacactttca
ggagatttctttacatatgctgatagaaatcaggattactggagtggttactatgtgtca
aggccattcttcaaagctgttgaccgtgtactagaacaaatgctccgtgcctcagagatt
ctgggttcatttgttctagggtactgtcagaagtttcagtgtgctaaactccccatcagc
ttctcacacaaactgacagcagcaaggaggaatttggcgctttttcagcatcatgatggg
gtaactggcacagctaaggatcatgttgtggtggactatggcactagaatgcacacttca
ctgcaagatctacagttatttatgtccagggcggttgaagtgcttttaggagatttccat
gatagatctgaccctacattgctatcgcattttgaaacagtgcaggaacgttcaaagtat
gatgttcagccggtgcatagggttcttgaccctcatgaagggaaggcacaatcgattgtc
ttttttaacccattagaacaaacaagggatgagattgttatggttgttgtaagtactctt
gacgtttctgttctgaattcaaacggttcctgtttgcaaagtcaagtttccccagagtgg
aagtttgtcagcgatgaaaagatatccacaggccggcaccgtctttattggagggcttct
gttcctgcactaggtttggagacctactatgtggttactgggcaggattgtgaaaaggct
attcctgctgtagtaaaaacattcacagcttcacagcaatttccttgccctgaaccttat
gtttgttcaaagctggaaggcaaaacagtggagatgaagaactcttattacactctttct
tttgatgtaagtcatggcctccttcagacagtaactggtcacaaggatggggaacaaatt
gtcataggtgaagaaattggcatgtacagaagccatggaagcggggcatacttgttcaaa
ccaattggtgaagctcattcaattgtcgaggaaggaggacatttcatccttactgaaggg
ccattggttcaagaagcccattctcttccaaaaactgaatggcataagtcacctctctca
catagtacacgcatttacgattgtggggactctatacaggatatgctgatcgagaaggaa
taccatgttgagcttgtcggccatgtttttaatgataaggaactgattgtcaggtacaag
acaaatattgacaaccaaaggatcttctattctgatctaaatggctttcagatgagtagg
aggcagacatatgataagattcctctacagggaaattattacccaatgccatcacttgcc
ttcttgcaggattcacttggtactcggttttctgtacactccaagcagtcattaggggca
gcaagcttgaaaaatggatggttagagattatgttggatcgtaggctggttcaggatgat
ggccgtggtctggggcagggagtaatggacaaccggcccatgaatgttatattccatctc
ctcagggagtccaatgtctcagctttgcctaaaacccacagtttgcttactcttcaacca
tctctcctctcgcaccgagttggggcgcatctgaactacccaatgcatgctttcatgagc
aaaaaacctcatgaaaaatccttcaagctgcctcaacagtcattcactccattaactgct
tctttgccctgcgatgtacatattgtgaacctaaaggtccctcagcccctaagatttcct
cacgctgaagcagccagccaaagatttgccattctgttgcagaggagaggctgggactca
tcatattgcaaaaggggtggattgcattgtacaacagttggggaagaaccagttaatctg
ttctacatgttcaaagatctctcagctgtgaatgtgaaggcgacttcgctgaatctctta
catgatgaccctgaaatgctagggtaccttgagcagattggtgatgttgctcaggaggga
aatgtacttatctcaccaatggagattcaggcgtacaagttagacctacagctaccatca
ttacaggaagagtag
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