Panicum virgatum (switchgrass): 120704034
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Entry
120704034 CDS
T07260
Name
(RefSeq) probable sucrose-phosphate synthase 3 isoform X1
KO
K00696
sucrose-phosphate synthase [EC:
2.4.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120704034
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.14 sucrose-phosphate synthase
120704034
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GFIT
Motif
Pfam:
Glycos_transf_1
GT-B_Sucrose_synth
S6PP
Glyco_trans_1_4
Glyco_trans_4_4
Glyco_transf_4
GATA_AreA
Motif
Other DBs
NCBI-GeneID:
120704034
NCBI-ProteinID:
XP_039844211
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Position
4K:complement(40512406..40521055)
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AA seq
983 aa
AA seq
DB search
MYGNDNWINSYLDAILDAGKGAAGAGAGAVAARGRGGGGGGGGYGDRPSLLLRERGHFSP
ARYFVEEVITGYDETDLYKTWLRANAMRSPQEKNTRLENMTWRIWNLARKKKEFEKEEAS
RLSKRRLETEKQRNDATADMSEDLFEGVKGEDAGDPSVAYGDSTTGNTPKISSFDKLYIV
LISLHGLIRGENMELGRDSDTGGQVKYVVELAKALSSSPGVYRVDLLTRQILAPNFDRGY
GEPDEMLASTSFKNLKFERGENSGAHIIRIPFGPKDKHLAKENIWPFIQEFVDGALGHVV
RMSKTIGEEIGSGCPVWPAVIHGHYASAGVAATLLSGALNVPMVFTGHFLGKDKLEGLLK
QGRQTREQINMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVMLARKLRA
LVKRCANCFGRYMPRMVIIPPGVEFGHMIHDFDLYGDEDSPSAASEDPSIWFEIMRFFTN
PRKPMILAIARPYAEKNITTLVKAFGECHPLRELANLTLIMGNREAISKMNKVSAAVLTS
VLTLIDEYDLYGQVAYPKHHKQSEVTDIYRLAARTKGAFVNVAYFEQFGVTLIEAAMHGL
PVIATKNGAPVEIHQVLDNGLLVDPHDQHSIADALYKMLSEKQFWSRCRENGLKNIHQFS
WPEHCKNYLSRILTLGPRHPAFGNKEDQKVPGNCRRHILVIAVDSVSKEDLIQIIRNSIE
ATRSGALSGSTGFVLSTSLTIAEICSLIKYTGLLPTDFDAFICNGGSDIYYPSQSSDVPS
NSLVTFALDNSYRSHIEYRWGGEGLRKYLVKWASSVVERRGRTEKQVIFEDSEHSSTYCL
AFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPIHASRSQALRYLSIRWGL
ELPDAVVIVGESGDSDYEELFGGLHKAIILKGGFNTPANRIHTVRRYPLQDVVALDSSNI
IGIEGFSSGDIRSAMQQLGIPTQ
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaacgacaactggatcaacagctacctcgacgccatcctcgatgccggcaag
ggcgccgcgggcgcgggcgcgggcgccgtcgccgccaggggccggggcggcggcggcggc
ggcggcgggtacggggaccggccctcgctgctcctccgcgagcgcggccacttctccccc
gcccgctacttcgtcgaggaggtcatcaccgggtacgacgagacggacctctacaagacc
tggctccgggcgaacgcgatgcggagcccgcaggaaaagaacacgcgcctggagaacatg
acctggaggatctggaacctcgccaggaagaagaaggagtttgagaaagaggaagccagt
cgcttgtcaaaacgccgtcttgagactgagaagcaacgaaatgatgctactgcagatatg
tctgaagatctctttgaaggagtgaagggagaggatgctggtgatccttctgttgcctat
ggtgatagcacaactgggaacacacctaagatcagttcatttgacaagctatacatagtg
ttgatcagccttcatggcctgattcgtggagagaatatggagcttggccgtgattcagat
actggtggccaggtcaaatacgttgtggaacttgcaaaagcattaagttcatctcctgga
gtttaccgggttgacctattgacaagacaaatcttagccccaaatttcgatcgtggctac
ggtgaaccggatgagatgctggcttcgacaagcttcaagaacttaaaatttgaaagagga
gagaacagtggtgcacatatcatcagaataccgtttggccccaaagacaagcatctagct
aaagaaaatatctggcctttcattcaagaatttgttgatggcgcactgggtcatgtagtg
cggatgtcaaaaacaataggcgaagaaattggcagtgggtgtccggtttggcctgctgtg
atccatggccattatgccagtgcaggagttgctgctaccctactatctggagcgcttaat
gttcctatggtgtttacagggcattttcttgggaaagataagttggaagggcttctcaag
caagggagacaaactagggaacagataaacatgacatacaaaataatgcgccgaattgag
gcagaggaattgtctctcgatgcgtccgaaatagttatcgcaagcacaaggcaagagata
gaagagcagtggaacttgtatgacggttttgaggtcatgcttgcaaggaagctccgtgca
ctagtcaagcgttgcgctaactgttttggtcgctatatgcctcgtatggttataattcct
ccaggtgttgaatttggccacatgattcatgattttgatttgtacggagatgaagatagc
ccatctgcagcctctgaggatccatctatttggtttgagataatgcgattcttcacaaat
cctaggaaacctatgattctggctattgcccgtccatatgctgaaaagaatattacaacg
cttgtgaaggcatttggtgaatgccatccattgagggagcttgctaaccttacattgata
atgggtaaccgggaggcgatttccaaaatgaataaagtcagtgcagctgttttgacatcg
gtgcttacattgattgatgaatacgatttatatggtcaagtggcatacccaaagcatcac
aagcagtctgaagttactgatatttatcgtttagcagcaagaacaaagggcgcttttgta
aatgttgcttactttgagcaatttggtgtcacattgatagaggctgccatgcatgggttg
cctgtaattgcaacaaaaaatggggctcctgttgaaatccatcaggttctggacaatggt
cttctcgttgatccccacgatcagcattcaatcgcagatgccctctataagatgctttct
gaaaagcagttttggtcaagatgtcgagagaatggactgaaaaatatacaccaattttct
tggcctgaacattgcaagaattacttgtcaaggatattaactcttgggccaaggcatcct
gcttttgggaacaaagaagaccagaaggtgcctgggaactgcaggaggcatatccttgtt
attgctgtggactctgttagcaaggaagatttaattcaaattatcagaaattctatcgag
gctactcgctccggagctttgtcgggttcgactggttttgtcctgtcaacttcattgaca
atagcagagatatgttctctaataaaatacacaggcctgctccctacagattttgatgcc
ttcatatgcaatggtgggagtgatatatattatccttcacagtctagtgatgtgccaagt
aattctcttgttacatttgcactggacaatagttaccgatcacatatcgagtatcgttgg
ggaggggagggtttaaggaagtacttggttaagtgggcttcttcagtagtagagagaagg
ggaagaactgaaaagcaagtcatctttgaagattcggaacactcttcaacatactgtcta
gcatttagagtggttaatccaaatcatttgcctcctttgaaagagctgcaaaagttgatg
agaatccagtcactacgttgtcatgctttgtataaccatggtgctaccaggctatccgta
attccaattcatgcatcacgatctcaggctctaaggtatttgtctattcgctggggcttg
gagttgccagatgctgttgttatcgttggcgaatccggtgattctgattatgaagaactg
tttggaggtcttcacaaggcaatcatccttaagggtggattcaatactcctgcaaatagg
atccatacggtcagaaggtaccctttacaggatgttgttgctcttgatagctcaaatatc
attggaattgagggtttcagcagtggtgacatcaggtctgcaatgcaacagcttggtata
cccacacaatga
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