Panicum virgatum (switchgrass): 120704670
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Entry
120704670 CDS
T07260
Name
(RefSeq) 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like isoform X1
KO
K00921
1-phosphatidylinositol-3-phosphate 5-kinase [EC:
2.7.1.150
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00562
Inositol phosphate metabolism
pvir01100
Metabolic pathways
pvir04070
Phosphatidylinositol signaling system
pvir04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
120704670
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
120704670
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120704670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120704670
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.150 1-phosphatidylinositol-3-phosphate 5-kinase
120704670
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Macropinocytosis
Kinases
120704670
Endosome - Golgi transport
Others
Others
120704670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIP5K
Cpn60_TCP1
baeRF_family5
Motif
Other DBs
NCBI-GeneID:
120704670
NCBI-ProteinID:
XP_039845080
LinkDB
All DBs
Position
4K:8973582..8981068
Genome browser
AA seq
1583 aa
AA seq
DB search
MGVPVARKSDSWTAELAMADCDGLGVRPINGGRGGAVEQRESGEKGPPVSPPERVFTPPA
PRMAAWRRMSSPGPLRCSTPSGCRSVGYEDGEDSDRYFSPQSEFSQDTSDTDSASTSISR
LYTFRLGTSSPLDSPIKQLGVGDTSPPSRRGAHSPRYPWNSGRVSDDVDSSFINSPPRDD
EQNKDVVQPVDFESRHIWYPPPPQDEGDDLENGFLKYDDDDDNDVCDGKVFGDVNDDYGD
GDDDDLLGTKGKHNIAHKEFLRSALHGHFKALVSQLLQGHGVDPVDGWSEIVASLAWQAA
TFVRPDTSKGGSMDPTDYVKIKCVASGHPNDSAFIKGVVCSKNVKHKRMVSKHENPRLLL
LGGALEHQKVTNKLASINSILQEKEYLKNAVAKIEAQHPHVVLVEKSIPLDAQQLLAKDI
SLVLNVKRSLLERISRCTGAQIASSIENVTSTMVGHCQTFWIERVTECSSPRMSNKKTVK
TLMFFDGCPRRLGCTIVLRGKSYEELKKVKLAVQFALFAAYHLSLETSYLADEGATLPKV
PSDLQLDKQIFSSSHCQQNLNEFQTIDERTSGNGCIMPCFDASSASQSHLRADLIHKEYV
EPHSRADSSQEDYNGGTIDVYPYSTKASMHDGCMEPIGRMLKVESDLDNGWNHISDEDRV
AIRDHNENHFTSDNPQSILVSLSIACPLRGIVCKQSQLFRIKFYGTFDKPLGRYFREDLF
VQTSCCESCKEPAESHVRCYTHQQGSLTISVRTLASVKLPGEHDGKIWMWHRCLRCKPKD
GVPPATQRVIMSDAARGLSFGKFLELSFSNHMTANRIASCGHSLQRDCLRFYGLGSMVAV
FRYSPVDILSVNLPPSVLDFAYPTTQDWVIKEAADVASRKEHLYREIVAKIDCIEQTIKA
QNVTMKPGLYNHVADLKELVKFEWKKYDVLSGFSNIDNLQKFRPTVDVLELNRLRRELVL
DIHIWDRRLYMMHSLTKENCHNVPTDAQCSGKLTENLLEEPKGVISCKHGTIENSLEQTE
PGTLELATDSAKPFPTREQNNTNGSHFGLKTNIAADVSLHSGSASISSVLGPSEIHSEGV
LGDELKAEKMLQKSQSSASNLSDRIDLAWTGSGQFVDDPSQCSMETVSVRPAALKDDPAY
QKVIAPIRIKSFDSAVSSRNRLLPVDDSNANIRRSYSQRPPKAIERTSRAWSPTFMNNLS
LSGMVDGEGRLLLSQNDSDVVVPIYDDEPSSMIAHAMTVPEYHRFLLPLMDENNESSVLN
YVAHKSSRSSSDGSMRSYGSDQAQAVTGNDSKDNHLTVCFEDEDSYSVDKAKFSVTCYFA
KQFDAIRRKCCPDELDYICSLSRCKRWSAQGGKSNVYFAKTLDDRFVIKQVTRTELDSFE
DYAVDYFKYLTESVSSGSPTCLTKILGLYQIIAKNLRDGKELKMDVMVMENLFFKRKVSR
IYDLKGSLRSRYNPDTSGNNKVLLDLNLLETLHTKPIFLGSKAKRRLERAVWNDTSFLAS
VDVMDYSLLVGIDEERKELVMGIIDYLRQYTWDKQLETWVKASGFLGGSKDVLPTIISPD
QYKKRFRKAMSKYFLTLPDQWSP
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgcccgtcgcgcggaagtccgattcttggactgctgagctcgcgatggcggac
tgcgacggcctcggcgtccggcctattaacggaggccgagggggggccgtggagcagcgc
gaatccggcgagaaagggcctccggtgtccccaccggagcgggtctttacgccgcctgcg
ccgaggatggctgcgtggcggcgcatgtcgtcgcctggtcctctccggtgctcaacgccg
agtggatgcaggagcgttgggtacgaagatggcgaggactcggacaggtacttctccccg
cagagtgagttttcccaagacacttctgatacggattcagcgagcacaagtatcagtagg
ttgtacaccttccggttagggacttcgagccctttagatagtcctatcaaacaattggga
gtaggagacacaagtcctccttccaggaggggtgcccattctcctaggtatccttggaat
tctggccgtgtatcagatgatgtggattctagctttatcaattcaccccctcgtgatgat
gagcagaataaggatgttgtacaaccagttgattttgagagtagacatatctggtatcct
ccaccaccccaggatgagggtgatgatcttgaaaatggttttttaaaatatgacgatgat
gatgacaatgatgtttgtgacgggaaggtttttggagatgttaacgatgattatggcgat
ggtgatgatgatgatttattggggaccaagggaaaacataatatagctcacaaagagttc
ctgaggagtgctttacatgggcatttcaaggcccttgtgtctcagttgctccaaggacat
ggagttgatcctgtggatggctggtcagaaatagtggcctcactagcatggcaggcagca
acctttgttcggccagatacaagcaaaggtggtagcatggatcccacagattatgtcaaa
atcaaatgtgtagcatcaggacatccaaatgatagtgctttcattaaaggtgttgtttgt
tcgaagaatgtaaaacataaacgtatggtgtcaaagcatgagaaccctaggttgcttctt
ttgggaggagcattggaacaccagaaagttacaaacaaactggcgtcgataaacagcatt
ctacaggaaaaggagtatcttaaaaatgctgttgctaagatagaagcccaacaccctcat
gttgtgctagtggagaaaagtataccgttggatgctcaacagcttcttgcaaaagatatc
tctttagtattgaatgtaaagagatcactcctggaaagaatatcacgctgcacgggtgct
caaattgcatcatctattgaaaacgttacttctacaatggttggacattgccaaacattc
tggattgagagagtcacagaatgttcatcaccaaggatgtcaaacaaaaaaacagtcaag
acgctgatgttttttgatggttgcccgagacgcttggggtgcacgattgttctaagaggc
aaatcctacgaagagttaaagaaggtcaaacttgctgtacagtttgctttatttgcagca
taccacttgtcacttgaaacctcatatcttgctgatgagggtgcaacacttccaaaagtc
ccttcagatcttcaacttgacaagcagattttttcctcgagtcattgtcagcagaatttg
aatgaatttcaaacaattgatgagagaacttctggaaatgggtgcatcatgccctgcttt
gatgcttcttcggcaagtcaatcccatttaagagctgacttaattcacaaggaatatgta
gaacctcattcaagagctgactcaagtcaggaagattataatggtggaaccattgacgtg
tacccttattccacaaaagcttcaatgcatgatggctgcatggaacctattggtcgaatg
ttaaaggttgaaagtgacttggataatggttggaatcatatatcagatgaagaccgtgta
gcaatacgtgatcataatgaaaatcacttcacatctgacaacccgcagagcattttggtt
tccttgtcaattgcgtgccctctgagaggaattgtatgcaagcaatctcaactctttcgc
ataaagttctatggtacctttgataagccacttggaagatatttccgcgaagacttattt
gttcagacttcatgctgtgaatcttgcaaggagcctgcggaatctcatgtgcgatgttat
actcatcaacaaggcagtctcacaatcagtgtcagaactcttgcatctgtcaagttacct
ggggagcatgatgggaagatatggatgtggcatcgatgtctcagatgcaaaccaaaagat
ggagtccctccagccacgcaaagggtgatcatgtcagatgcagcacgtggattatctttt
ggaaaatttctggaacttagcttttcaaaccacatgacggccaatcgaattgcctcctgt
ggacactccctccagagggactgtcttcgtttttatgggcttggaagcatggttgctgta
ttccgttattcaccagtagacattctttctgtcaacttaccaccctctgtactggacttt
gcatatccaacaactcaagattgggtcatcaaagaggctgctgatgtagcctctaggaag
gagcacctttatagggaaattgtggctaaaattgactgcattgaacagacaattaaagca
cagaatgttaccatgaagccaggcttgtataatcatgttgctgatcttaaggagttagtt
aaatttgagtggaagaagtatgatgttttgtcaggattttccaacatagataacttgcag
aaatttagaccaactgtggatgttctagagctcaatcgtctgaggcgagagcttgtactt
gatattcacatatgggaccgcagactgtacatgatgcactccctcactaaagagaactgt
cataatgtgccgactgatgcacaatgttctggtaagcttactgaaaacttattagaagaa
ccaaagggtgtgatatcctgtaaacatgggactatcgagaattctctagaacagaccgaa
ccaggtacattggaactggccacagattcagcaaaaccattccctacaagggaacagaac
aatacaaatgggtcacattttggattgaaaaccaacattgcagctgatgtatctctgcat
tctggctcagctagtatcagctctgtccttggcccaagtgaaatacatagtgaaggagtg
ctgggtgatgaacttaaagctgaaaagatgttgcagaagtcacaatcttctgcctccaat
ctttctgacagaattgacttagcatggactggatctggtcagtttgtcgacgatccatca
caatgtagcatggagacagtttcagtcagacctgctgccctgaaagatgatcctgcatac
cagaaggttatagcaccaattagaatcaaatcattcgattctgctgtcagttccagaaat
aggttgttgcctgttgatgattcaaatgctaacataagaagatcttattctcaaaggccc
ccaaaggctattgagagaactagcagggcttggtctccaacgttcatgaacaacctttca
ctttctggtatggtggatggtgagggtcggttgctactgtctcaaaatgattcagatgtt
gtcgttccaatttatgatgatgagccatctagcatgatagcccatgccatgactgttcca
gaatatcacaggttcttgttgccactgatggatgagaataatgaatcaagcgtattgaat
tatgttgcacataagtcttctaggagctcttcagatggatcaatgcggagctatggttct
gatcaggctcaagctgtaactggaaacgattctaaggataaccatttgacagtttgtttt
gaggatgaagactcatattctgttgataaagcaaaattttctgtgacatgttattttgca
aagcagtttgatgcaatcagaagaaagtgctgcccagatgagttagactatatctgctct
ttaagccgctgcaagagatggagtgctcaaggtggcaagagtaatgtctactttgccaaa
acactagatgacagatttgtcataaaacaagtgactcggacagaactagattcatttgag
gattatgcagttgattacttcaaatatttaacagaatctgtatcttctggaagcccaact
tgcctcactaaaatccttggtctttaccagatcattgccaagaatttgagagatggaaag
gagctgaagatggatgtaatggtcatggaaaacctatttttcaagaggaaggtatcaaga
atatatgacctaaaaggttccttgcgttcccgatacaatcctgatacatcagggaacaac
aaggttctcttagatctgaatctgttagagacacttcacacgaagcccatttttcttgga
agcaaagcaaagcgaaggctggaacgagcagtctggaatgatacgtcttttctggcatcg
gtggatgtgatggactactctcttctagttggcatcgatgaagaaaggaaagagcttgtg
atggggatcatcgactatcttcggcaatacacttgggacaaacaactagagacttgggtc
aaggcatcaggtttcttgggtggctccaaagatgttctgccaacgatcatatccccagat
cagtataagaagagattcaggaaggccatgtcgaagtacttcttgactctccctgaccaa
tggtcaccgtaa
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integrated database retrieval system
