Panicum virgatum (switchgrass): 120705683
Help
Entry
120705683 CDS
T07260
Name
(RefSeq) phosphoribosylaminoimidazole carboxylase, chloroplastic-like
KO
K11808
phosphoribosylaminoimidazole carboxylase [EC:
4.1.1.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00230
Purine metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
120705683
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.21 phosphoribosylaminoimidazole carboxylase
120705683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRC
ATP-grasp
RS_preATP-grasp-like
PurK_C
Dala_Dala_lig_C
CPSase_L_D2
PurT_C
2-Hacid_dh_C
ATP-grasp_5
GARS_A
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
120705683
NCBI-ProteinID:
XP_039846095
LinkDB
All DBs
Position
5K:complement(3049666..3056115)
Genome browser
AA seq
624 aa
AA seq
DB search
MRARLLSAPSAAAASSSSSVPSGGARPRRAFWRPRAPAAAPPPLSLRARASMQPAAPLPE
RQGGPPVHGVSNTVVGVLGGGQLGKMLCQAASQMGIKMAILDPLQGCPASSVCHEHVLGS
FSDGDAVREFAKRCGVLTVEIEHVDAATLEKLEEQGVDCEPKASTITIIQDKYRQKKHFS
NFGIPLTDFMEVDTLHSIEEAAERFGYPLMVKSKRLAYDGRGNAVAQKKEDLSSVVASLG
GFEHGLYVERWTPFVKELSVIVARSRDGSTVCYPVVETIHKDNICHIVEAPAEVSAKIKK
SATDVAEKAIKSLEGAGVFAVELFLTEDDEILLNEVAPRPHNSGHHTIESCYTSQYEQHL
RAILGIPLGDLSMKAPAAIMYNILGEDEGDAGFFLAHQLIERALNIPGASVHWYAKPEMR
KQRKMGHITIVGPSKASVKSRLDKLLQRDTYDPKKVSPRVSIIMGSDSDLNVMKDAEVIL
KKFNIPVETTIVSAHRTPERMYDFAKSAYGRGIEVIIAGAGGAAHLPGMVASLTSLPVIG
VPVKTQSLSGLDSLLSIVQMPKGIPVATLAIGNAENAGLLAVKILAKTDPELTDKVLKYQ
DDLRDMVLEKAERLENIGWEEYLK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccaggctactcagcgccccgtccgccgccgccgcctcctcctcctcctccgtc
ccctcggggggcgcccgcccgcgccgcgcgttctggaggccccgggcccccgccgccgcg
ccgccgccgctctcgttgcgcgcccgagcctccatgcagcccgccgcgcccctgcccgaa
cggcagggcggcccgccggtgcacggcgtctccaacacggtggtcggggtgctggggggc
ggccagctggggaagatgctctgccaggcggcgagccagatggggattaagatggccatc
ctggaccccctccagggttgcccggccagctctgtttgccacgagcacgttttgggtagc
ttcagcgacggcgacgcggtccgggagttcgccaagaggtgtggggtcctaacggtggaa
attgagcatgttgatgccgcaacacttgagaagctggaagaacagggtgttgattgcgag
cccaaagcctctacaatcacgattattcaggacaagtacaggcagaaaaagcatttctca
aattttgggatccctttgactgacttcatggaagtagatactttacacagtatagaggaa
gcagcggaaaggtttggctatcctctaatggtaaaaagcaagaggttagcatatgatggt
cgaggcaatgcggtcgcccaaaagaaagaggatctatcttctgttgttgcttctttgggt
gggtttgagcatggattgtatgtcgagcgatggactcctttcgtgaaggaactttctgtt
attgtggcaaggagcagagatggttctacagtctgctatcctgttgttgaaaccatacac
aaggataacatctgtcatattgtcgaagctcctgctgaggtatctgccaaaataaagaag
tcagctactgatgtggctgaaaaagctataaaatcattagaaggtgctggtgtgtttgct
gtagagttatttttaacagaagatgatgagattttattgaacgaggtagcccctaggcct
cacaacagcgggcatcacacgattgagtcatgttacacctcacaatatgagcagcactta
cgtgccattcttggaattccacttggtgatctttcaatgaaagcacctgctgcaataatg
tacaacatcctgggagaggatgagggtgacgcaggattctttttggctcatcagctaatt
gagagggcattaaatattccaggtgcatcagttcattggtacgcaaaaccagagatgcga
aagcaaagaaagatgggtcacattacaatcgtgggaccttcaaaggcgagtgtaaaatca
cgcctggacaagttgctgcaaagggacacgtatgaccccaagaaagttagccctcgtgtt
tctataataatggggtctgattctgatcttaatgtaatgaaagatgctgaggtgatatta
aaaaaatttaacatacctgttgagactacaattgtttcagcacatcgtacaccagagcgg
atgtatgattttgctaagtctgcatatggcaggggtattgaggtcataattgctggtgca
ggcggagcagctcacttaccagggatggtagcttcattgacttctcttccagtaattgga
gtacccgtcaagactcagtcgctttcaggacttgattccctcctatctattgtgcaaatg
ccaaaaggtattcctgttgcaactcttgctattgggaatgctgaaaatgcaggcttgctg
gcagttaagattctggctaaaacagatcctgagcttacagataaggtgcttaaataccag
gatgatctgcgggacatggtcttggagaaagcagaaaggcttgagaacataggctgggag
gaatatctgaagtga
DBGET
integrated database retrieval system
