KEGG T07260: 120705978

Panicum virgatum (switchgrass): 120705978

Entry

120705978         CDS       T07260

Name

(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like

K10703

very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:4.2.1.134]

Organism

pvir Panicum virgatum (switchgrass)

Pathway

pvir00062

Fatty acid elongation

pvir01040

Biosynthesis of unsaturated fatty acids

pvir01100

Metabolic pathways

pvir01110

Biosynthesis of secondary metabolites

pvir01212

Fatty acid metabolism

Module

pvir_M00415

Fatty acid elongation in endoplasmic reticulum

Brite

KEGG Orthology (KO) [BR:pvir00001]
09100 Metabolism
  09103 Lipid metabolism
   00062 Fatty acid elongation
    120705978
   01040 Biosynthesis of unsaturated fatty acids
    120705978
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pvir01004]
    120705978
Enzymes [BR:pvir01000]
4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.134  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
     120705978
Lipid biosynthesis proteins [BR:pvir01004]
Fatty acid synthase
  Component type
   120705978

SSDB

Motif

Pfam:

PTPLA

Other DBs

NCBI-GeneID:

120705978

NCBI-ProteinID:

XP_039846462

LinkDB

Position

5K:complement(6983553..6987738)

AA seq 230 aa
MSSPHYNSSMAAGGSVVGRLYLSVYNWIVFYGWFQVLYYTTLTLLARGHESVYEAVEQPL
LFAQTAALLEILHATVGFVRSPISATIPQLSGRLFVTWGILWSFAETHSHVLVTSLVLSW
SITEVIRYSFFGLKEAFGIIPYRHLWLRYSTFLVLYPIGLVSELGLIYAALPSMKASGKY
CLKMPNKWNSSFSYYYFSIILSILYIPGFPYLFHYMLTQRKKALSKAKAA

NT seq 693 nt +upstreamnt +downstreamnt
atgtcttctcctcactacaactcttcaatggcggccggtgggtcggtggttggccggctt
tacctctcagtgtacaactggattgtcttctatggatggtttcaagttctgtactacaca
accttgacattgttggccagggggcatgagagtgtctatgaagctgttgagcagccgctg
ctattcgcacagactgctgccttactggagattcttcatgctactgtagggtttgtgaga
tctcccatctctgcaactattccacaactttctgggaggttgtttgttacatggggcatc
ttgtggagctttgctgagacacattcccacgttctcgttacttccttggtcctaagctgg
tctataactgaggtcataagatactctttctttggtttgaaagaagcatttggaattata
ccttacaggcatctgtggcttaggtacagtacatttcttgtgttgtatcctatcggtctt
gtcagtgagcttggcttaatctatgccgcccttccttccatgaaggcatctggaaaatac
tgtctcaagatgcctaacaaatggaattcctcctttagctactactattttagtattatt
ttatccatcctctacattccagggtttccatacttgttccattatatgctcacccaaagg
aagaaggccttatcaaaggcaaaagctgcataa

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