Panicum virgatum (switchgrass): 120706866
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Entry
120706866 CDS
T07260
Name
(RefSeq) glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like
KO
K10527
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.35
1.1.1.211
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00071
Fatty acid degradation
pvir00592
alpha-Linolenic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01212
Fatty acid metabolism
Module
pvir_M00087
beta-Oxidation
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
120706866
00592 alpha-Linolenic acid metabolism
120706866
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
120706866
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
120706866
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
120706866
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Pyr_redox_2
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
120706866
NCBI-ProteinID:
XP_039847541
LinkDB
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Position
5K:19968415..19975240
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AA seq
723 aa
AA seq
DB search
MAAKGRTELEVGADGVAVITICNPPVNSLSIDVLYSLKESYEEALRRNDVKAIVVTGKGG
KFSGGFDISSFGGLQGGQTMQPKVGYIAIDILTDTLEAATKPSVAAIDGLALGGGLEVAM
ACHARIATPMAQLGLPELQLGIIPGFGGTQRLPRLVGLTKSLEMMLLSKPIKGGEAHELG
LVDALVSPNDLVNTARQWALDIYELRRPWIKSLYKTDKLEPLGEAREILKFARAQAQKQA
ANLHHPLVCIDVVEEGIVAGPRAGLWKEATAFQDLLFSDTCKSLLHVFFSQRATSKIPGA
TDLGLMPRKISKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSR
VRKGKMTDERYEKAMSLVTGVLDYEHFKDVDLVIEAVIENVKLKQQIFSDLENYCPSHCI
LATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKK
IKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLGMDVYKIDRACTKFGMPMGPFRLADLV
GFGVAVATGMQYLENFPERVYKSMLLPLMMEDNRAGEATQKGFYKYEGKRKATPDPEIMK
YIEKSRKMAGVTPDPELLKLSEKDIVEMVFFPVINEACRVLDEGIAVKASDLDIASIFGM
GFPPYRGGVMHWADSIGAKYIHGKLEEWTNRYGGFFKPCSYLADRAAKGIPLSALANKVQ
ARL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaggggaggacggagctggaggtgggcgccgacggcgtcgccgtcatcacc
atctgcaacccgccggtcaactcgctctccatcgacgtcttatatagcttaaaggaaagc
tatgaagaagcccttcggagaaacgatgtcaaagccattgttgttacagggaagggagga
aaattttctggaggatttgatattagttccttcggtggtcttcagggaggccaaacgatg
caaccaaaggttggttatatagcaattgatatcctcacagataccctagaagctgcgaca
aagccatcggtggcagcaatagatggtcttgctcttggcggtggattagaagttgccatg
gcatgccatgcacgtattgcaactccaatggctcaattaggtcttccagaacttcaactt
ggaattattccaggatttggaggaacacaacgactcccacgtcttgttggactgacaaaa
tctctggaaatgatgttgctatctaaaccaatcaagggtggtgaggcacatgaactgggt
ttggttgatgccttagtttctcctaatgatttggtgaatactgctcgtcaatgggctttg
gatatatatgaacttaggaggccatggatcaaaagcctttacaagactgacaagctagaa
cctcttggagaggctcgggaaattctgaagtttgcaagagctcaagctcaaaagcaagca
gctaatcttcaccacccacttgtttgtattgatgttgttgaagaaggcatagttgcagga
ccaagagcagggctctggaaggaagcaactgctttccaggacctgcttttttcagataca
tgtaaaagcttgctccatgtgtttttttctcagagggcaacatcaaagattccaggtgct
acagacttggggttgatgcctaggaaaataagtaaagttgccatattaggtggtggactt
atgggttcaggaattgcaaccgcaatgatattaagtaactatcctgtgatacttaaagaa
gtaaatgaaaagtttctaaatgctggaattgacagaatcaaagccaatttgcagagccgg
gtgcggaaagggaaaatgaccgacgagagatatgagaaggctatgtctcttgtcacaggt
gtccttgattatgaacatttcaaagatgtggacctagttattgaggcagttattgagaat
gtgaagttgaagcagcaaatattttctgacttggaaaactactgtccttcccattgtatc
cttgctactaacacatctacaattgatcttaatctaattggagagaaaacaaagtctcaa
gatcgtattgttggtgcacacttctttagtcctgcgcatgtgatgccacttctggaaata
gtccgtacccagcacacctcaccacaagttgttgttgacttgttggatgttgggaagaag
ataaaaaagacaccgatagtggttgggaactgtacgggctttgcagttaacaggatgttc
tttccgtacactcaatcagcactcttttatgttgatcttggtatggatgtttataagatt
gatcgtgcctgtaccaaattcggaatgcccatgggtcctttcagactggcagacctggtt
ggatttggtgtggctgtggccactggtatgcaataccttgaaaatttcccagagagggtc
tacaaatcaatgctacttcctctcatgatggaggacaatagggcaggtgaggccacgcaa
aaggggttttacaagtacgagggaaagaggaaggccacacctgatcctgaaatcatgaaa
tatattgaaaagtctaggaaaatggcaggagttacaccagatcctgagttgctgaagcta
agtgagaaagacatagttgagatggtgtttttcccggtgataaatgaagcctgccgggtc
cttgatgagggtatcgcagtcaaagcttctgaccttgacattgcctccatctttggcatg
ggattcccaccttacaggggaggtgttatgcactgggcggattccatcggtgcaaagtac
attcatggaaagttggaagagtggacaaaccggtatggcggcttcttcaagccttgttct
taccttgctgatagagctgcaaaagggattcctctgagcgcactggcaaataaagttcag
gctcggctataa
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