Panicum virgatum (switchgrass): 120707821
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Entry
120707821 CDS
T07260
Name
(RefSeq) cytidine deaminase 1-like
KO
K01489
cytidine deaminase [EC:
3.5.4.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00240
Pyrimidine metabolism
pvir01100
Metabolic pathways
pvir01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
120707821
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.5 cytidine deaminase
120707821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dCMP_cyt_deam_2
dCMP_cyt_deam_1
OTT_1508_deam
CDL
DUF2065
Motif
Other DBs
NCBI-GeneID:
120707821
NCBI-ProteinID:
XP_039848769
LinkDB
All DBs
Position
5K:complement(46157578..46158957)
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AA seq
312 aa
AA seq
DB search
MGEEQVAPRPEAAAAELTGFVMSAEEAERAAAAAGVATVQDLLPLLVPSAMKRAVVPISR
FPVGAVGLGASGRVYVGVNLEFRGLPLCHTVHAEQFLVANAAAAGESALRAVAVSHMPCG
HCRQFLQEIRGASGIQILVTTEAEEGCAPEWRTVASLLLRPFGPHDLLPADVPLVLEPHD
NPLGDPVPAVANGFAAGDLEARLREAAEAAARASHAPYSECPSGFAVADGDGRIYAGGCL
ESAAYNPTLGPVQAAIIAMVAAGGGSAGDVAAAALVEKERAAVAQETTARIFLGAVAPHA
SLHVYNYRPSDA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggagcaggtggcgccgaggccggaggccgcggcggcggagctgacggggttc
gtcatgagcgccgaggaggccgagcgcgccgcggcggcggccggcgtggccaccgtgcag
gacctgctgccgctgctggtgccgtccgcgatgaagcgggcggtcgtcccgatctcgcgg
ttccccgtcggcgccgtggggctgggcgccagcggccgcgtctacgtcggggtcaacctc
gagttccgcggcctcccgctgtgccacaccgtccacgcggagcagttcctcgtcgccaac
gcggccgccgcgggggagtcggcgctgcgcgccgtcgccgtctcccacatgccctgcggc
cactgccgccagttcctgcaggagatccgcggagcctctggcatccagatcctcgtgacc
accgaagccgaggaaggctgcgcgcccgagtggcgcacggtggcgtccctcctcctccgc
cccttcgggccccacgacctcctccccgcggacgtgcccctcgtcctcgagccgcacgac
aaccccttgggcgaccccgtccccgcggtcgccaatggcttcgccgccggcgacctggag
gcgcgcctgagggaggctgcggaggcggccgcgcgggcgtcgcacgcgccgtacagcgag
tgcccgtcgggattcgcggtggcggacggcgacggcaggatctacgccgggggctgcctg
gagtccgcggcctacaacccgacgctgggtcccgtccaggcggccatcattgcgatggtg
gcagccggaggaggctccgccggggacgtggcggcggcggcgctcgtggagaaggagcgg
gcggcggtggcgcaggagacgacggccaggatcttcctgggtgccgtggccccacatgcc
agcctccacgtgtacaactacaggccgtccgatgcgtga
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