Panicum virgatum (switchgrass): 120707988
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Entry
120707988 CDS
T07260
Name
(RefSeq) probable glutamate carboxypeptidase LAMP1 isoform X1
KO
K01301
N-acetylated-alpha-linked acidic dipeptidase [EC:
3.4.17.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120707988
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.21 glutamate carboxypeptidase II
120707988
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
120707988
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Gene cluster
GFIT
Motif
Pfam:
TFR_dimer
Peptidase_M28
PA
Peptidase_M20
NB-ARC
Nicastrin
Motif
Other DBs
NCBI-GeneID:
120707988
NCBI-ProteinID:
XP_039848987
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Position
5K:complement(47841571..47845545)
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AA seq
744 aa
AA seq
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MAAAAAMATSRGGKQRQPLLQSPTPAAPNGGGAAGRRRFLAFLAVTAALVASYQLLEPTD
SSRYRALFLTLGSNATAAAHLRALTLRPHVAGTEANAAAARYVLHAFSSLSFPAHITPYS
VLLSYPAHRSLTLAAARGLAAKPFSLVQETYNGDPFAEASAEVIPTYFAYSASGSVAAEV
VYANYGHNEDYAYLASRGVDVAGKVALVRYGDIHCEDMVRNARAAGAAAAIVYTDAKDFG
GGATRGAKRKWFPDARWLPPTGVQVGTLYYGNGDPTTPMWPSCAAGDDCERLSAEDLSGS
EAMPGIPALPVSARDGDTILKAMGGDVAPPKWQGGEDAPVYRLGPGPAVLNLTYIGNETL
ATIENVYAVIQGKEEPDRYVIIGNHRDAWTFGAIDPNSGTAAMLEIAERLSKLQAKGWRP
RRTIILCSWDAEEFALIGSTEWVEENMDTLASRAIAYLNVDISVFGPGGLKPRATPQLDE
LIKEASKMVPDPDEPSQTLYDTMMRHHPPITRVAGAGTDFAAFLQHIGVPSLDMSYGLFE
EYPVYHSLYDDYVWVERFGDPLFHRHVAVASVWGLIALKLADDEIIPFNYVSYASELEEC
TKDIAEKCKGFPVTLSPLQKSIKQLESAATKIHQEKLLQAENWSLKTRQYTLKVREINDR
LMMAERAFTNREGLAGRPWYKHMQIYASSDQDDWGTKAFPGIVSAMDKAKKSNTTESWRS
LQHEIYRVARAVSKASAVLDGGLT
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcagcagccatggccacgtctcgcggcggcaaacagcggcagccgctcctc
cagtctcccacgcccgccgcccccaacggcggcggcgcggccgggaggcgcaggttcctt
gccttcctcgccgtcacggcggctctggtggcgtcgtaccaactcctcgagccaaccgat
tcgtcgcggtaccgcgcgctcttcctcaccctcggctccaacgccaccgcggccgcccac
ctccgcgcgctcaccctccgcccccacgtcgccggcaccgaggccaacgcggccgcggca
cgctacgtgctccacgccttctcctccctctccttccccgcgcacatcaccccttactcg
gtgctcctctcctaccccgcccaccgctccctcaccctcgccgcggcgcgcggccttgcc
gccaagcccttctccctggtgcaggagacctacaacggcgacccgttcgccgaggcctcg
gcggaggtcatcccgacgtacttcgcctactcggcgtcaggctcggtcgccgccgaggtc
gtctacgccaattacgggcacaacgaggactacgcctacctcgcctcccgcggcgtcgac
gtcgcgggcaaggtcgcgctcgtgcggtacggcgacatccactgcgaggacatggtgcgg
aacgcgcgcgccgcgggcgccgccgcagcgatcgtgtacaccgacgccaaggacttcggc
ggcggcgccaccaggggggcgaagcggaagtggttccccgacgcgcggtggctgccgccg
accggcgtgcaggtggggaccctgtactacgggaacggcgacccgaccacgcccatgtgg
ccgtcgtgcgcggctggggacgactgcgagcggctgagcgcggaggacctgagcgggagc
gaggccatgcccggcatcccggcgctgccggtgtcggccagggacggcgacacgatcctc
aaggcgatgggcggcgacgtggcgccgccgaagtggcagggcggcgaggatgcgcccgtg
taccggctcgggcccggcccggcggtgttgaatctcacctacattggaaacgaaacctta
gcaaccatcgaaaatgtttatgcggtgatccaagggaaagaagagcctgatagatacgtg
atcataggcaaccatcgtgatgcgtggacatttggagcaatcgatcctaacagtgggaca
gcagccatgcttgagatcgcggagcggctgtccaagctacaagccaaagggtggaggcct
agacgaacaataatcctgtgcagttgggacgcagaagagtttgctctgatcgggtcaact
gaatgggtagaggagaacatggacactctagcttcgagagctattgcttacctgaacgtg
gacatatcagtgtttggtcctgggggtcttaaaccccgtgcaacccctcaacttgatgag
ttgatcaaagaagcgagtaaaatggtacctgatcctgatgagccgtctcaaaccttgtat
gacaccatgatgcgccatcatccaccgataactagagtggctggtgctggaactgatttt
gcagcatttctccagcatattggggtcccatcacttgacatgtcttacggactgtttgaa
gaataccctgtttaccactcgctatatgatgattatgtctgggtcgagaggtttggagac
cccttgttccacagacatgttgcagtggccagcgtctggggtctgattgctctgaaactt
gctgatgatgagatcatacccttcaattatgtctcttatgcgtccgaactggaggaatgc
acaaaagatatcgcagagaaatgtaaaggattccctgtcactttatctcctttacagaag
tccatcaagcagcttgaaagcgcagccactaaaattcatcaggagaagttgctgcaagca
gaaaactggagcctaaagacaaggcagtacacactgaaagtcagggagataaacgaccgg
ttgatgatggccgagcgagcgttcaccaaccgagagggactggccggcagaccatggtac
aagcatatgcagatctatgcatcctcggatcaagatgactggggcaccaaagcattccct
ggtatcgtctcggccatggacaaggcgaagaagtccaacacaaccgaatcctggcggtcg
ctgcagcatgagatttacagggttgcaagggcagtgtccaaggcttctgcagtcctggat
ggtgggctaacatga
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