Panicum virgatum (switchgrass): 120708004
Help
Entry
120708004 CDS
T07260
Name
(RefSeq) probable glutamate carboxypeptidase LAMP1
KO
K01301
N-acetylated-alpha-linked acidic dipeptidase [EC:
3.4.17.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120708004
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.21 glutamate carboxypeptidase II
120708004
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
120708004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFR_dimer
Peptidase_M28
PA
Peptidase_M20
Motif
Other DBs
NCBI-GeneID:
120708004
NCBI-ProteinID:
XP_039849011
LinkDB
All DBs
Position
5K:48027350..48033046
Genome browser
AA seq
725 aa
AA seq
DB search
MPPLDGADEPSARAPLLPSPAAPRRAAARLHPLPLIVAAAFVASFHLLFLAPGPSHYQSL
FLSLGSNDTAAAHLRALTQRPHVAGTRANSLAAAYVRDALASHSFPTRLTPYSVLLSYPA
RRSLSLSAPGRGTVHFALEQETYPGDPYAAVSAEAVPTFLAYAASGSVAAEAVYANYGRA
EDFAYLAARGVNVTGKVAVARYGKVFRGDIVRNARDAGAAAAVIYTDAKDYAAGKAFPDG
PWMPPTGVQVGSTFKGVGDPTTPMWASSEGCQRLSIAEAMASDDMPGIPALPVSGMDGEA
ILRLIGGDVAPEEWQGGAAAPAYRLGPGPAVLNLTYVGNETMATIQNVISVIEGKEEPER
YVILGNHRDAWTFGGVDPNSGTAALLELAQRLSKLQKKGWRPRRTIILCNWDAEEYALIG
STEWVEENRAMITSRTVAYLNVDSAVYGLGFYASATPQLDELLKEASKQVQNPDNRTESL
YDLWMASNTSPLIGRLGGGGSDYSAFVQHIGIPSADMSIGSDYAVYHSLYDDFIWMEKFG
DPLFQRHVAAASIWGLVALRLSDEEILPFNYNYYAAELENGAMGINKRVLGMPVSLSPLH
KSIKEFRRAVLKVDSELKALQTWKIWAPWRSCPLKIRDINDRLIMTERAFTEREGLFGRP
WYKHLIYGPSLHNDYGAEIYPGIDDAIQTAQRTKTSKSWQAVQNEIHRVARVINQAALVL
TGGLT
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctggacggggccgacgagccctcggcgcgggccccgctccttccgtccccc
gccgccccccgccgcgcggccgcgaggctccacccactcccgctcatcgtcgcggccgcc
ttcgtcgcctcgttccacctgctcttcctcgcgccgggcccctcccattaccagtccctc
ttcctctcgctcggctccaacgacaccgccgcggcgcacctccgcgccctcacccagcgc
ccgcacgtcgccggcaccagggccaactccctcgccgccgcctacgtgcgcgacgcgctc
gcctcccactccttccctacccgcctcaccccctactccgtcctcctctcctaccccgcg
cgccgctcgctctccctctccgcgccgggccgcggcaccgtccacttcgctctggagcag
gaaacctaccccggggacccctacgccgcggtctccgcggaggccgtccccaccttcctt
gcctacgcggcctccggctcggtcgccgccgaggccgtctacgccaactacggccgcgcg
gaggacttcgcctacctcgccgcccgcggcgtcaacgtcaccgggaaggtcgccgtcgcg
cgctacggcaaggtgttccgcggcgacatcgtccggaacgcgcgcgacgccggcgcggcc
gcggcggtgatttacaccgacgccaaggactacgcggcggggaaggccttcccggacggg
ccgtggatgccgcccaccggcgtgcaggtgggtagcacgttcaagggggtcggagacccc
acgacgccgatgtgggcgtcgtcggaagggtgccagcgcttgagcatcgcggaggcgatg
gcctccgacgacatgcctgggataccagcgctgccggtgtccgggatggacggggaggcc
atactacggctcattggcggcgatgtggcgcccgaggaatggcaaggaggcgccgccgcg
ccggcttaccggcttgggcccgggccagcagtgctcaacctgacctacgtagggaatgag
acaatggctacaattcagaatgttatttcggtgattgaagggaaagaagaacctgaacgg
tatgtaatccttggaaatcatcgtgatgcatggacgtttgggggagttgatccaaacagc
gggacagcagccttgcttgagctagctcaacggttgtctaagctgcaaaagaagggctgg
aggcctcggcggaccatcatcttgtgcaactgggacgccgaagagtatgcattgatagga
tccactgaatgggtcgaggagaacagagcaatgataacttcaaggactgttgcttactta
aatgttgattctgcggtgtatggtcttggattttacgcatcagcaactcctcaacttgac
gaattgcttaaagaagctagtaaacaggtacaaaatccggataacagaactgagagtctg
tatgacttgtggatggcttctaacacctctcccttgatcggaagattaggtggtggaggg
tctgattattctgcatttgttcaacacattggtattccctcagcagacatgtctattggg
tcagactatgcagtctaccatagtttgtacgatgacttcatatggatggagaagtttgga
gatcccttgttccagaggcatgtcgcagcggcaagcatatgggggcttgttgctctgcgg
ctgtcagatgaggagatcctacccttcaactacaactactatgccgcagagcttgagaat
ggagcaatgggtataaataagagagtactgggaatgcctgtcagtttatctcccctgcac
aagtctatcaaagaattcagaagggcagttctgaaagtggattctgaattgaaggctcta
cagacatggaaaatttgggcaccatggagaagctgtccattgaagatcagagacatcaac
gaccggttgattatgactgaaagggcgttcacagagcgggaagggttgtttggaagacca
tggtacaaacacctgatttacgggccttcactgcacaacgattatggagctgaaatatat
ccaggtattgatgacgccatccagacagcacagagaacaaagacatcaaaatcctggcaa
gctgtacagaatgagattcacagggtagccagagtcataaatcaggcagcattagttcta
actggagggctaacgtga
DBGET
integrated database retrieval system
