Panicum virgatum (switchgrass): 120709969
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Entry
120709969 CDS
T07260
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial-like
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00785
Lipoic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120709969
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
120709969
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
120709969
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GFIT
Motif
Pfam:
OxoGdeHyase_C
E1_dh
Transket_pyr
Motif
Other DBs
NCBI-GeneID:
120709969
NCBI-ProteinID:
XP_039851528
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Position
5K:41476422..41480512
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AA seq
905 aa
AA seq
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MQLLHLVADFQTHGHTMARLDPLGLDVPDDIDLSLYHFTEADLDRKFFLGFSTTPGLLSD
YYSPVVTLREILRKLRQCYCGGAGYEYMHIPDRDKRQWLRDRIEIGKPRDDDGKNRRLIV
LESLIRATLFENFLAARCPSSKRYGIDGGEALIPGVEALFDRAAELGVENVVIGTSHRGR
LNLMANVLGRPVSQIISELTVGPRPVQVADGEGRIFTGSGELYLQQGVSCDRPAQGGKNV
HLSLVAHPCHLEAVDPVVMGKTRAKQFFSGDAGRTRTMGVLVHGDGAFTGQGVVYETLNL
SALKNYTTGGTVHIVLNNRVAATAGRSAGRSSRHCTDVARALGAPVFHVNGDDVEAVVRV
CRLAAEWRQTFHSDVVVDLVCYRRFGHNELDDPTLTLPEMYQVIKNHPSSLNLYEQKLLG
TGEVSNEDVQKIHDKVNIFLDEEFEKSKDFVLSKRDWLSASWTGFKPPEQISRVFDTGVK
QDRLKLVGRAITRLPVNFKPHRAVEKLLKQRVAMIETGEKIDWAFAEALAFATLVEEGNH
VRLSGQDVERGNFNQRHAILHDQETGARYCPFDHVVMNQNEGLFKVSNSLLSEYAVLGFE
MGYCMENPNSLVLWEAQFGDFANCAQVIFDQFLSCAEARWLRQTGLVVLLPHGYDGQGPD
HSGAHLERFLQMCDDNPFVIPEMEPTLNRQIQECNWQVVNVTTPANYFHVLRRQIHREFR
KPLIVMAPKNLLWHKDCKSNIAEFDEVEGHTGSDSQGTRFKRLIEDCNNHNSTEESVHRL
ILCSGKVYCELDDERKNSGRTDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMN
MGAFSYVSPRLRTTMRALGRGSFEDIKYVGRAPSASAATGFPSVHAQEQSELLKKALEPE
PIKNW
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcctccacctggtcgccgatttccagacccacggccacaccatggccaggctc
gacccactcggcctcgacgtccccgatgacatcgacctcagcctctaccacttcacggag
gccgacctcgacaggaagttcttcctcggcttctcgacgaccccgggcttactttctgac
tactacagcccggtcgtcactctccgtgaaatcctccggaagctccggcagtgctactgc
ggcggcgccggctacgaatacatgcacatcccggacagggacaagcgccaatggctcagg
gacaggatcgagatcggcaagccccgcgacgacgacggcaagaaccgtcgcctcatcgtg
ctcgagagcctcatccgggccacgctgtttgagaacttcctcgccgcccggtgcccgagt
tccaagcgatacggcatcgacggcggcgaggcgcttatccccggcgtggaggcgttgttc
gacagggcagccgaactcggcgtcgagaacgtggtcatagggacgtcgcacaggggtagg
ctcaacctcatggccaacgtcctcggcaggcccgtatcgcagataatcagcgagctcacc
gtcgggccgaggcctgtccaagttgccgacggcgaaggccggatcttcaccggctccggc
gaactctacttacagcagggtgtctcctgcgaccggcctgctcaaggtggcaagaacgtc
cacctgtccttggtcgcccatccctgccacctcgaggccgtcgaccccgtcgtcatgggc
aagacgcgcgcgaagcagttcttctccggcgacgccggcaggacgaggaccatgggcgtc
ctcgtccacggcgacggcgccttcaccggccagggcgtggtttacgagacgctcaacctg
agcgccctcaagaactacaccaccggcgggaccgtccacatcgtcctgaacaaccgggtc
gccgccacggccggccggagcgccggcaggtcctcccggcactgcaccgacgtcgccagg
gccctcggtgccccggtgttccacgtcaatggcgacgatgtggaagcggtcgtccgcgtg
tgcaggcttgcagctgagtggcgccagacgttccactcggatgtggtggttgatctggtc
tgctaccgccggtttgggcacaacgaacttgacgatcccaccttgacgctgccagaaatg
taccaggtgattaagaaccatcccagttcattgaacctttatgaacaaaaactcctaggg
acaggcgaagtttcgaatgaagatgtacaaaagatccatgacaaagtgaacatattctta
gacgaagagtttgagaagagcaaagattttgttctcagcaagagggactggctctcggct
tcttggactggcttcaagccacccgagcagatatctcgcgtatttgatacaggggttaag
caggaccgactgaaacttgttggacgggcgattaccagactacctgtgaacttcaagccc
catagagcagtggaaaagcttctgaagcagcgtgtcgcgatgatcgaaaccggtgagaaa
atcgattgggcgtttgcggaagcgcttgcctttgcgacactagtagaggaaggcaatcat
gttaggctaagtgggcaggatgtggagagagggaatttcaaccaaaggcatgcgattcta
catgaccaagaaactggagcaagatactgcccgttcgaccatgttgtgatgaatcagaat
gaggggctgtttaaagttagcaacagtctactttcagaatatgctgttcttgggtttgaa
atgggttactgcatggagaaccccaactcgctggttctctgggaagcacaatttggtgac
tttgccaactgtgcgcaagtgatctttgaccaatttctgagctgcgcggaggcaagatgg
ttgcgccaaactgggcttgttgttctactgccacatggttatgatggccaaggccctgat
cattctggggcccatttggagcgcttcctccagatgtgtgatgacaatcccttcgtcata
cctgagatggaaccaacgctcaacaggcagatccaggagtgtaattggcaagtcgttaat
gtgacaactcctgcaaattattttcatgtgttgcgtcgtcagatacacagggagttccgg
aagccgctgatcgtcatggctcctaagaacttactctggcacaaggactgcaagtccaat
atcgccgagttcgatgaggttgaaggccatacaggatctgatagccagggaacacgcttc
aaacggttgatagaggattgcaacaatcataattcaaccgaggaaagtgtccatcgtctg
atattgtgctctgggaaagtgtactgtgaacttgatgacgagcgtaaaaactcaggccgt
actgatgtcgcgatctgcagagtcgagcagctttgcccattcccatatgatcttgtccag
agagagctaaaacgatatccaaatgcggagatcgtgtggtgccaagaggagcccatgaac
atgggtgcattcagctacgtctctccccggctgcgcacaacaatgagggcccttgggcga
ggctcatttgaagacataaagtatgtaggcagggctccttcagcatctgcagccacaggg
ttcccgtccgttcatgcgcaagaacagtcggagctgctgaagaaagcgttggagccagag
ccgatcaagaactggtga
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