KEGG   Panicum virgatum (switchgrass): 120711447
Entry
120711447         CDS       T07260                                 
Name
(RefSeq) 3-isopropylmalate dehydratase small subunit 1-like
  KO
K01704  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00290  Valine, leucine and isoleucine biosynthesis
pvir00660  C5-Branched dibasic acid metabolism
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01210  2-Oxocarboxylic acid metabolism
pvir01230  Biosynthesis of amino acids
Module
pvir_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00660 C5-Branched dibasic acid metabolism
    120711447
  09105 Amino acid metabolism
   00290 Valine, leucine and isoleucine biosynthesis
    120711447
Enzymes [BR:pvir01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.33  3-isopropylmalate dehydratase
     120711447
    4.2.1.35  (R)-2-methylmalate dehydratase
     120711447
SSDB
Motif
Pfam: Aconitase_C
Other DBs
NCBI-GeneID: 120711447
NCBI-ProteinID: XP_039852904
LinkDB
Position
1K:complement(44360845..44369160)
AA seq 254 aa
MAAAPSAAATAAGASTAALAPRPAPTSALLRRTQVTPLRHPALKCRRAGPLAPKAAAAAA
AAGGSSPSSAVFHGEVFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFAGLPSAAY
PTPFVAPGEESTHYAVIVGGANFGCGSSREHAPVALGAAGARAVVAESYARIFFRNSVAT
GEVYPLELTDAGAWKECKTGDVVTVDLGNSVFINHTSGKEYKLKPIGDAGPVIEAGGIFA
YARKTGMIASKAAA
NT seq 765 nt   +upstreamnt  +downstreamnt
atggcggcggctccgtcagcggcggcgacggcggcgggggcgtcaacggcggcgctcgcc
cccaggccagcgcctaccagcgcgctcctccggcgcacccaggtcacccctctccgccac
cccgcgctgaaatgccgccgggctgggcccctcgcccccaaggcggctgcggccgcggcc
gcggcgggcggcagctccccctcgtccgcggtcttccacggcgaggtattcgtggtgggc
gacaacatcgacaccgaccagatcatccccgccgagcacctcaccctggtgccgtccaag
cccgacgagtaccgcaagctcggctccttcgccttcgcggggctcccctccgcggcctac
ccgacgcccttcgtcgccccgggagaggagtccacccactacgccgtcatcgtcggcggg
gccaacttcgggtgcggctcctcccgcgagcacgcgcccgtcgcgctcggggccgccggc
gcgcgcgccgtcgtggcggagagctacgcgcgcatcttcttccgcaactccgtggccacg
ggagaggtctaccctctggagctcaccgacgccggagcctggaaggagtgcaagactggg
gatgtcgtcaccgtggaccttggcaattccgtctttattaaccacacatccggcaaggag
tacaagctgaaacctattggcgatgccgggccggtcattgaggctggagggatctttgcg
tatgcccggaagactggaatgattgcgtcgaaagccgcagcatga

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