KEGG   Panicum virgatum (switchgrass): 120712796
Entry
120712796         CDS       T07260                                 
Name
(RefSeq) lysine-specific demethylase JMJ30-like
  KO
K24444  [histone H3]-dimethyl/trimethyl-L-lysine36 demethylase [EC:1.14.11.27 1.14.11.-]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvir03036]
    120712796
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     120712796
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120712796
SSDB
Motif
Pfam: ARM_KDM8_N Cupin_8 JmjC_2
Other DBs
NCBI-GeneID: 120712796
NCBI-ProteinID: XP_039854611
LinkDB
Position
6K:complement(43336277..43341306)
AA seq 422 aa
MATGCGEKRAALLRRITEEGGFAFVASAEKAAAGDVRAAEAAREMAWEQLHSAPRDEVGA
AWRDAYALACLHVAALRGGAGDDDRRAALRALDMGLIMGGGLLRAELEDAIARVVADRRG
GRDGDSEAAAAAGDVERWKEGIAGDGDLADVLKLLPVKSLSRKKIERRSCIPLEAFIRDY
FICESPVILSGCIDHWPARTKWKDIKYLERIAGDRTIPVEVGKKYACTEWKQELITFSQF
LERMWSSDSANLTYLAQHPLFDQIKELREDITVPEYCSAGGGELQSINAWLGPHGTLTPL
HHDLHHNLFAQVLGRKYFRLYPASVSVELYPQTETILSNTSQVDLDKFDEKEFSKAADLE
FIDGILEEGDLLYIPPKWWHYMSYGADHLFYLAVDLTFVIIYDRALTLTVLSIISSRNIF
LE
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggccaccggctgcggggagaagcgggcggcgctgctgcggcggatcacggaggagggc
ggcttcgcgttcgtggcgtccgcggagaaggcggccgcgggggacgtccgcgcggccgag
gcggcgcgggagatggcgtgggagcagctgcactcggcgccccgggacgaggtgggcgcc
gcgtggcgggacgcctacgcgctcgcctgcctccacgtggccgccctccgcggcggcgcc
ggcgacgacgaccggcgcgccgcgctccgggcgctcgacatgggcctcatcatgggcggg
gggctcctccgcgcggagctcgaggacgccatcgccagggtcgtcgccgaccgccgcggc
ggtcgcgacggggactctgaggcggcggccgcggcgggggacgtggagaggtggaaggaa
gggatcgcgggggacggagaccttgccgatgtactcaaacttctacctgtgaagtcccta
tcacgtaagaaaattgagaggcgatcatgcattcctttggaggcatttatacgtgattac
tttatatgtgagtcccctgttatactcagtggctgcattgatcattggcctgcaaggaca
aaatggaaggacataaaatacctagagaggatagctggagatcgtactattcctgttgag
gtcgggaaaaagtatgcttgtactgagtggaaacaggagcttatcacattttctcaattt
ctcgagaggatgtggtcgagtgattcagcaaacctgacatatctagcacagcatccattg
tttgaccagataaaggagctccgtgaggacattacagttcctgagtactgttctgctgga
ggtggtgaactccagtcaattaacgcttggttaggccctcatgggaccctgaccccactg
catcatgacctacatcacaacctttttgctcaggttttgggaaggaaatattttagactt
tatcctgcttctgtatctgtggaactgtaccctcagacagagacaatactgagcaatact
agtcaggtagatcttgacaagtttgacgagaaggaattctcgaaggcagcagatcttgaa
ttcatagatggcatattagaggaaggtgacctgctttacattccaccaaaatggtggcat
tacatgagctatggagcagatcatttgttttacttggctgtggatttaacttttgtaatt
atttatgacagagcactaacgctaactgtactgtccataataagtagtagaaacattttt
ttagagtga

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