Panicum virgatum (switchgrass): 120712798
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Entry
120712798 CDS
T07260
Name
(RefSeq) probable lipoxygenase 8, chloroplastic
KO
K00454
lipoxygenase [EC:
1.13.11.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00591
Linoleic acid metabolism
pvir00592
alpha-Linolenic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00591 Linoleic acid metabolism
120712798
00592 alpha-Linolenic acid metabolism
120712798
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.12 linoleate 13S-lipoxygenase
120712798
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Motif
Pfam:
Lipoxygenase
Motif
Other DBs
NCBI-GeneID:
120712798
NCBI-ProteinID:
XP_039854615
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Position
6K:43382474..43391612
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AA seq
948 aa
AA seq
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MALLIKPSPSSSTQTCCGWSWSTAAAQSPLVLVPASFPSSLSRRPLPSLLVQFGRPRRGR
GNRIAIGCVASASSSARSEAPSSSKGSSSAAASSGSAAMAAAAARVKAVATIKATVGGFL
DSLRPSRAINDVKDLIGRSLYLELVSSQLDAKTGQEKPTLRSYAHRVADNDDEVVTYEAD
FDVPAGFGEVGAVLVTNEHHTEMFLEDIRLMMPPSSSGDVGVVIRCRSWVQPKSGGGGDD
APGKRVFFANKPYLPSQTPPGIWSYRRKDLEQKRGDGRGQRKSTDRVYDYDTYNDLGDPD
NGADKTRPVLGGTKQFPYPRRCRTGRPMSTKDPKTETRSGDNYVPRDEAFSEEKQLQFSV
KTLQSVLHAAVPAVQSTLIDPDLGFPSFFVIDKLFEDGVELPRAEQLGFLAGVLPRLLQK
LRDSPGDQVLLFDRPANVKKDKFAWLRDEEFARETLAGMNPYAIELVREFPLKSKLDPAV
YGPAESAITAEVLEQQMRRAMTVAEAVKQKRLFMLDYHDLFLPYVHRIRAKEHTTMYGSR
TVFFLCDDGTLRLLAIELTRPASPAQPQWRRVFTPSTDTTESWLWRMAKSHVRAHDSGHH
ELVSHWLRTHCAVEPYIIAANRQLSEMHPVYQLLRPHFRYTMRINALARSALINAGGIIE
LSFSPQKYAMELSSAAYDQLWRFDTEALPADLIRRGMAEEDPTAEHGLRLAIEDYPFAND
GLLIWDAIKGWVQAYVSRFYPDAGSVAGDAELQAFWAEVRAVGHGDKKDAPGWPALDSPE
SLAHALTTIIWVASAHHAAVNFGQYDFGGYFPNRPSIARTNMPVEEPVDAAALATFLDNP
DQALRECFPSQVQATLVMAVLDLLSTHSPDEEYLGGLETAPWSDDAEVQAAYGEFNARLK
EIEGIIDARNADGRLKNRCGAGIVPYQLMKPFSEAGLTGKGIPNSTSI
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctcatcaagccatcaccaagcagcagcacccaaacttgctgtggttggagt
tggagcacagcagcagcacaaagccctctcgtcctcgtgcctgcctcctttccctcctcg
ttgagccgccgcccgttgccgtcgttgctggtccagttcggccggccgcggcgcggacga
gggaataggatcgccataggttgcgtggcgtcggcgtcgtcatcggcgcggtcggaggcg
ccgagcagcagcaaaggcagtagcagtgcggcggcgtcatcaggttcggcggccatggcg
gcggcggcagcgcgcgtgaaggcggtggcgacgatcaaggccaccgtgggcgggttcctc
gacagcctgcgaccgtcgagggccatcaacgacgtcaaggacctcatcggcaggtcgctc
tacctcgagctcgtcagctcccagcttgacgcaaagacggggcaggagaagcccaccctc
cggagctacgcgcacagggtggcggacaacgacgacgaggtggtgacctacgaggcggac
ttcgacgtgccggcgggcttcggtgaggtcggcgccgtgctcgtcaccaacgagcaccac
acggagatgttcctcgaggacatcaggctgatgatgccgccctcctcctccggcgacgtc
ggcgtcgtcatccggtgcagatcgtgggtgcagcccaagtccggcggcggcggcgacgac
gcgccggggaaacgcgtcttcttcgccaacaagccttacctgccgagccagacgccgccg
gggatctggagctaccggagaaaggacctggagcagaagcgcggcgacggccgcgggcag
cggaaatccaccgaccgtgtctacgactacgacacctacaacgacctcggcgaccccgac
aatggcgccgacaagacccggccggtcctcggcggcaccaagcagttcccctacccgcgc
cgctgccgcaccggccggcccatgtccaccaaagacccgaagacggagacgaggagcggc
gacaactacgtgccgagggacgaggcgttctcggaggagaagcagctgcagttctcggtg
aagacgctgcagtcggtgctccacgccgccgtgccggccgtgcagtccacgctcatcgac
cccgacctcggcttcccgtccttcttcgtcatcgacaagctgttcgaggacggggtcgag
ctgcccagggccgagcagctcggattcctcgccggcgtcctgccgcgcctgctgcagaag
ctccgcgacagccccggcgaccaggtcctcctcttcgacaggcccgccaatgtcaagaag
gacaagtttgcatggttgagggacgaggagttcgcgagggagacgcttgccggcatgaat
ccgtacgcaatcgagctcgtcagggagttccctctgaagagcaagctcgacccggcggtc
tacgggccggcggagtcggcgatcaccgccgaggtgctggagcaacagatgaggcgcgcc
atgacggtcgccgaggcggtgaagcagaagcggctcttcatgctggactaccacgacctg
ttcctgccgtacgtgcacaggatccgggcgaaggagcacaccaccatgtacggctcccgc
accgtcttctttctctgcgacgacggcactctgcggctgctggccatcgagctcacccgg
ccggcgtcgccggcgcagccgcagtggcggcgcgtgttcaccccgtccacggacaccacc
gagtcctggctgtggcggatggccaagtcccacgtccgcgcccacgactcgggccaccac
gagctcgtcagccactggctgcgcacgcactgcgccgtggagccgtacatcatcgccgca
aaccggcagctcagcgagatgcaccccgtctaccagctgctgcgcccgcacttccgctac
accatgcggatcaacgcgctcgcgcggtcggcgctcatcaacgccggtggcatcatcgag
ctctccttctcgccgcagaagtacgccatggagctcagctccgccgcgtacgaccagctc
tggcgcttcgacacggaggcgctccccgccgacctcatccgccgggggatggccgaggag
gatcccacggcggagcacggcctgaggctcgcgatcgaggactacccgttcgccaacgac
ggcctgctgatctgggacgccatcaaggggtgggtgcaggcgtacgtctcgcggttctac
cccgacgccggcagcgtcgccggcgacgcggagctgcaggcgttctgggcggaggtgcgc
gccgtgggccacggcgacaagaaggacgcgccggggtggccggcgctggactcgccggag
agcctggcgcacgcgctgacgaccatcatctgggtcgcgtcggcgcaccacgccgccgtc
aacttcgggcagtacgacttcggcgggtacttccccaaccggccgtccatcgcgcgcacc
aacatgccggtggaggagcccgtcgacgccgccgcgctcgcgacgttcctggacaacccg
gaccaggcgctccgggagtgcttcccgtcgcaggtgcaggcgacgctggtgatggccgtg
ctggacctgctgtccacgcactcccccgacgaggagtacctcggcgggctggagaccgcg
ccgtggagcgacgacgccgaggtgcaggcggcgtacggcgagttcaacgcgcggctcaag
gagatcgaggggatcatcgacgcgaggaacgcggacgggaggctcaagaaccgctgcggc
gccggcatcgtgccgtaccagctcatgaagcccttctctgaggccggtctgacgggcaag
ggcatccccaacagcacgtccatctga
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