Prionailurus viverrinus (fishing cat): 125160439
Help
Entry
125160439 CDS
T09889
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125160439 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125160439 (LIG4)
Enzymes [BR:
pviv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
125160439 (LIG4)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
125160439 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
125160439
NCBI-ProteinID:
XP_047705343
LinkDB
All DBs
Position
A1:complement(78805676..78815598)
Genome browser
AA seq
911 aa
AA seq
DB search
MATPQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRRFHDALHKNQKDV
RDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFATIAYFVLKPRCLQKGSLTVQQVNDLLDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSAFHNDAAELHNVTTDLEKVCRQLHDPSVGLTDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGFNYTD
QFGDSPREGSLTPFIHSAFKTDVQTCILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGRETLKKRYDILTSVFTPIPGRIDIVQKTEAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDTLIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSMFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILC
GTEKPEVYIEPCHSVIVQIKATEIVPSEMYKTGCTLRFPRIEKIREDKEWYECTTLDDLE
QLRGKASGKLASKHLYVGGDDEPQEKRRKAAPRIKKVVGIIEHLKAPNLSNVNKVSNVFE
DVEFCVMSGTNSHPKPDLENRLAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNEHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSGEQSPGETASMIANLEYRYSWDHSPLSMFRHHIIYLDLYAVVNDLSTKIEGTRLAF
TALELRFHGAKVVSCLAQGVSHVIIGEDHSRVADLKAFRRTLKRKFKILQQDWVTDSIDK
CELQEENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctaccccacagacttcacaaactgttgcgtctcacgttccttttgcagatttatgt
tcaactttagaaagaatacagaaaagtaaaggacgggcagaaaaaatcagacacttcagg
gaatttttagattcttggagaagatttcatgatgcccttcataagaaccaaaaagatgtc
agggactctttttatccagcaatgagacttattctccctcagctcgaaagagaaagaatg
gcctatggaatcaaagaaaccatgcttgctaaactttatattgaattgcttaacttacct
agagaaggaaaagatgcccttaagcttttaaattacaggacacccactggaactcgtgga
gatgctggagactttgcgacgattgcatatttcgtgttgaaaccaagatgtttgcagaaa
ggaagtttaacagtacagcaagtaaatgaccttttagactcaattgccagcaataattct
gccagaagaaaggacctaataaaaaagagtcttcttcagcttataagtcagagttcggca
ctggaacaaaagtggcttatacggatgatagtaaaggacttgaaacttggctttagtgag
caatctgtattttctgctttccacaatgatgctgccgagttgcataatgtcaccacggat
cttgaaaaagtctgtaggcaactgcacgatccttccgtcggacttactgatatttctatc
actttattctctgcctttaaaccaatgctggctgccatagcagatattgagagaattgag
aaggacatgaaacaccagagtttctacattgagaccaagctagacggtgagcgtatgcaa
atgcacaaggatggggatgtgtatcagtacttctctcggaacgggtttaactatacagat
cagtttggagattctccacgggaaggctctcttacaccattcattcacagtgcattcaaa
acagacgtgcaaacctgtatcctggatggcgagatgatggccttcaaccctaatacacaa
acttttatgcaaaaggggaataagttcgatatcaagagaatggtggaagattccgatctg
caaacttgttactgtgtttttgacgtactgatggttaataataaaaagctagggcgtgag
accctgaaaaagaggtacgacattctcactagtgtttttacaccaataccaggtaggata
gacatagtgcaaaaaacagaagctcatacgaagaaagaagtaattgatgctttgaatgaa
gcaatagacaaaagagaagagggaatcatgatcaaacatcctctatccatttacaagcca
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtcgatgggttgatggat
gaactggacaccttaattgtggggggctattggggtaaaggttcgcgaggcggaatgatg
tctcattttctgtgtgctgtagcagagaaacctcctcctggtgaaaaaccctccatgttt
cacactctctgtcgtgttggttcaggttataccatgaaagaactgtatgatctgggtttg
aaattggccaagcattggaagccttttcataaaaaagctccaccaagtagcatcttatgt
gggacagagaagccagaagtgtacattgagccttgtcattctgtcatcgttcagattaaa
gcaacagagatcgtccccagtgagatgtataaaactggctgcaccttgcgtttcccccga
attgaaaagatcagagaagacaaagagtggtatgaatgtaccaccctagatgacttagaa
caacttcgagggaaagcatctggaaagcttgcgtccaaacacctttatgtcgggggtgat
gatgaaccacaagagaagaggcggaaagctgccccaaggatcaagaaagttgttggaatc
attgagcacctaaaagcacctaacctttctaatgtaaacaaagtttctaatgtatttgaa
gatgtggagttttgtgttatgagtggaacaaacagccatccaaagcccgatctggagaac
agacttgcggaatttggtggttatatagtacaaaatccaggcccagacacctactgtgtg
attgcagggtctgagaacatcagggtgaaaaacataatttcttccaatgaacatgatgtt
gtcaaacctgagtggctgttagagtgttttaagaccaaaagctgtgttccgtggcaacct
cgctttatgattcatatgtgcccatcgacgaagcagcattttgcccgtgaatatgattgt
tatggtgatagttatttcgttgatacagatttgaaccaactgaaagaagtgttctcagga
attaaaaattccggcgaacaaagtcctggagaaacagcttccatgattgctaatttagaa
tatcgatattcctgggaccactccccactcagtatgtttcgacaccacattatttatttg
gacttgtatgctgttgttaatgacctgagtaccaaaatcgaggggacgaggttagctttt
acagctttggaacttcgatttcatggagcaaaagtagtttcttgtttagctcagggagtg
tctcatgtaatcattggggaggatcatagtcgtgttgcagatttgaaagcttttcgaaga
actcttaagagaaaatttaaaatcctgcaacaagattgggtaactgattcaatagacaag
tgtgaattgcaggaggaaaatcagtatttggtttaa
DBGET
integrated database retrieval system
