Prionailurus viverrinus (fishing cat): 125162076
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Entry
125162076 CDS
T09889
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125162076 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pviv04990
]
125162076 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
pviv04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
125162076 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
125162076
NCBI-ProteinID:
XP_047708577
LinkDB
All DBs
Position
A3:complement(113877984..114288681)
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AA seq
1717 aa
AA seq
DB search
MAGPWLRWGLLLWAGLLASSAHGRVRRITYVVRPGPGLAAGALPLGGPPRPRTFNVALDA
RYSRGSAGAGAPSRASPGAPSERTRRTSQPGGAALQGLRPPPPPEPARPGAPGGQLHPKP
GAHPAAAPFAKQGRQVVRSKVPPESQSGGGSRLQVQQKQQLQGVNVCGGQCCHGWSKAPG
SQRCTKPSCVPPCQNGGMCLRPQLCVCKPGTKGKACETAAAQDTSSPGFGGQSLAAASSW
VPPEQAAKHTSSKKADTLPRVSPVAQMTLTLKPKPSVGLSQQIHSQVTPLSSQNVMIHHG
QTQEYVLKPKYFAAQKVISGEQSTEGSFPLTFKQGQVMAPFQLSNHTGRIKVVFTPSICK
VTCTKGSCQNSCEKGNTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCP
PNFTGKLCQIPVHGASVPKLYQHSQQSGKALGTHVVHSTHTLPLTMTSQQGVKVKFPPNI
VNIHVKHPPEASVQIHQVSRIDGPTGQKTKEAQAGQSQISYQGLPVQKTQTVHSTYSHQQ
VIPHVYPVAAKTQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPS
YHGYNQMMECLQGYKRVNNTFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFGPDPTF
SSCVPDTPVISEEKGPCYRLVSSGRQCMHPLSVHLTKQLCCCSVGKAWGPHCEKCPLPGT
AAFKEICPGGMGYTVSGVHRRRPIHHHVGKGPVFVKPKNTQPVAKSTHPPPLPAKEEPVE
ALTFSREHGPGVAEPEVATAPPEKEIPSLDQEKTKLEPGQPQLSPGISTIHLHPQFPVVI
EKTSPPVPVEVAPEASTSSASQVIAPTQVTEINECTVNPDICGAGHCINLPVRYTCICYE
GYKFSEQQRKCVDIDECTQVQQLCSQGRCENTEGSFLCICPAGFMASEEGPNCIDVDECL
RPDVCGEGHCINTVGAFRCEYCDSGYRMTRGGRCEDIDECLTPSTCPDEQCVNSPGSYQC
VPCTEGFRGWNGQCLDVDECLDPQICTNGTCSNLEGSYMCSCHKGYSPTPDHKHCKDTDE
CQQGNLCIKGQCKNTEGSFQCTCGQGYQLSAAKDQCEDIDECQHHHLCSNGQCRNTEGSF
LCVCDQGYRASTLGDHCEDINECLEDKSVCQGGDCINTEGSYDCTCPDGFQLNDNKGCQD
INECEQPGLCDPHGECLNTDGSFHCVCEQGFSISADGRTCEDIDECVNNTVCDSHGFCDN
TAGSFRCLCYQGFQAPQDGQGCVDVNECELLSGVCGEAFCENVEGSFLCVCADENQEYSP
MTGECRSRASGDLDDDQPKEEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNC
EIFPCPVVGTAEFTEMCPRGKGFVPTGESSYDAGDENYKDADECLLFGQEICKNGFCLNT
QPGYECYCKQGTYYDPVKLQCFDMDECQDPNSCIDGQCVNTEGSYNCFCTHPMVLDASEK
RCIRPTESHEQIEETDVYQDLCWEHLSDEYVCSRPLVGKQTTYTECCCLYGEAWGMQCAL
CPMKDSDDYAQLCNIPVTGRRRPYGRDALVDFSEQYAPEADPYFIQDRFLNSFEELQAEE
CGILNGCENGRCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECDELNNRMSLCKNAKCINT
EGSYKCVCLPGYVPSDKPNYCTPLSTALNLEKDSDLE
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccctggctcaggtgggggctgctgctctgggcagggctgctcgcgtcgtcg
gcgcacggccgggtgcggaggatcacgtacgtggtgcgcccgggccccggcctggcggcg
ggcgccttgcccctgggcgggcctccgcgcccgcggaccttcaacgtcgcgctcgacgcc
aggtacagccgcggctcggcgggcgccggggctcccagccgcgcctctccgggggccccc
tcggagcggacgcgccgcacgagccagccaggcggcgcggccctgcaggggctccggccg
cctccgccgcccgagccggcgcggcccggggcccccggcgggcagctccaccccaagccc
ggcgctcacccggcggccgccccgttcgccaaacaaggcaggcaagtcgtgcgctccaaa
gtgccgccggagagccagagcggcgggggctcgaggctgcaggttcagcagaagcagcag
ctgcagggagtcaatgtctgtggagggcagtgctgccatggctggagtaaggcccctggc
tcccagaggtgcaccaaaccaagctgtgttccaccatgccagaatggagggatgtgtctc
cggcctcaactctgtgtgtgtaaaccggggaccaagggcaaagcctgtgagacagcagct
gcccaggacacctcatccccaggctttggagggcagagtcttgcggctgcttcctcctgg
gtccctcctgagcaagcagcaaagcacacttcgtctaagaaggcagacactcttccaaga
gtcagtcctgtggcccagatgaccttgaccctcaagccgaagccttccgtaggactgtcc
cagcagattcattctcaagtgacaccactttcctcacagaatgtgatgatacatcatggc
cagacccaggagtatgtgctgaagcccaagtacttcgcggcccagaaggtgatctcggga
gagcagtccactgaaggttcgttccctttgacattcaagcagggtcaagttatggcgcct
tttcagttgagtaaccacactggccgcatcaaggtggtctttactccgagcatctgtaaa
gtgacctgcaccaagggcagctgtcagaacagctgtgagaaggggaacaccaccactctc
attagtgagaacggtcacgctgccgacaccctgacggccacgaacttccgagtggtaatt
tgccatcttccatgtatgaatggtggccagtgcagttcaagagacaaatgccagtgccct
ccaaatttcacagggaagctttgtcagatcccagtccatggtgccagtgtgcctaaactt
taccagcattctcagcagtcaggcaaggcattgggaacgcacgtcgtccactctacacat
accttgcctctgaccatgactagccaacaaggagtcaaagtgaaatttcctcccaacata
gtcaatatccatgtgaaacaccctccggaggcttcagttcagatacatcaggtttcaaga
attgatggcccaacaggccagaagacaaaagaagctcaagcgggccaatcccaaatctct
taccaagggcttcctgtccagaagacccagaccgtacattccacgtactctcaccagcag
gtcattccccacgtctaccctgtagctgctaagacgcagcttggccggtgcttccaggaa
accattgggtcacagtgtggcaaggcgctccctggcctttcgaagcaggaggattgctgt
ggaactgtgggtacctcgtggggctttaacaaatgccagaaatgccccaagaagccgtcg
tatcatggatataaccaaatgatggaatgtctgcaaggttataagcgggtcaacaacacc
ttttgtcaagatattaatgaatgccagctacagggcgtgtgccctaatggtgagtgtttg
aataccatgggcagctatagatgtacctgcaaaatgggatttggcccggatcctaccttt
tcaagttgtgttccggatacccctgtgatctctgaagagaaagggccctgttaccgactt
gtcagttccggaaggcagtgtatgcaccctctgtctgttcacctcaccaagcagctctgc
tgttgtagtgtgggcaaagcctggggcccacactgtgagaaatgtccccttccaggcaca
gctgcttttaaggaaatctgtcctggtggaatgggttatacggtttctggcgttcataga
cgcaggccaatccatcaccatgtaggtaaaggacctgtatttgtcaagccaaagaacact
caacctgttgctaaaagtactcatcctccacctctcccagccaaggaagagccagtggag
gccctgaccttctcccgggaacacgggccaggagtggcggagccagaagtggcaactgca
ccccctgagaaggaaataccttcattggatcaagagaaaaccaaacttgagcctggtcaa
ccccagctctctccaggcatctcaacgattcacctgcatccacagtttccagtggtgatt
gaaaaaacatcacctcctgtgcctgtggaagtagctcctgaggcttctacatcaagtgcc
agccaagtgattgcacctactcaagtaacggaaatcaatgaatgtactgtgaaccctgac
atctgtggagcaggacactgcattaacctgcctgtgaggtatacgtgtatatgctatgag
ggctacaagttcagtgagcaacagaggaaatgtgttgatattgatgaatgcactcaggtc
caacagctctgttcccagggacgttgtgaaaacaccgagggaagtttcttgtgtatttgc
ccagcaggatttatggccagtgaggagggtcctaactgcatagatgttgacgagtgcctg
aggccagatgtgtgtggggaaggacactgcatcaataccgtgggggccttccggtgtgaa
tactgcgacagcgggtaccgcatgacccggggcggccgttgtgaggatattgatgaatgt
ttaactccaagcacttgtccagatgagcagtgcgtgaattctcctggatcttaccagtgt
gttccctgcacagaagggttccgaggctggaatgggcaatgtcttgatgtggatgagtgt
ctggacccacagatctgcacaaatggtacttgctcgaacctcgaaggctcctatatgtgt
tcatgccacaagggctacagcccaaccccagaccacaagcactgtaaagatactgatgag
tgtcagcaggggaatctgtgcataaaagggcagtgcaagaacactgagggctccttccag
tgtacctgtgggcagggctaccagctgtcagcagcaaaagaccagtgtgaagatattgat
gaatgtcagcatcatcatctctgcagtaatggacagtgcaggaacacagagggctccttc
ctctgtgtttgtgaccagggttacagagcatccacccttggagaccactgtgaagatatc
aatgaatgcttggaggacaagagtgtttgccagggaggagactgcattaacaccgaaggg
tcctatgattgtacgtgtccagatggattccagctaaatgacaataaaggatgtcaagat
attaatgaatgtgaacagcctggactctgtgatcctcatggagagtgtctaaacacagat
ggttcttttcactgtgtctgcgaacagggtttctcaatttcagcagatggccgtacatgt
gaagatattgatgaatgtgtaaacaacactgtttgtgacagtcacgggttttgtgacaat
acggctggctccttccgctgcctctgttatcagggctttcaggccccacaggatgggcaa
gggtgtgtggatgtgaacgaatgcgagctgctcagtggggtatgtggtgaagccttctgt
gaaaatgtggaagggtccttcctttgtgtgtgtgctgatgaaaaccaggaatacagcccc
atgaccggggagtgtcgctcccgggcctcgggagacttagatgatgatcaacccaaagaa
gaaaagaaagaatgctactataatctaaatgatgccagtctctgcgataatgtgctggcc
cccaatgtcaccaaacaagagtgctgctgtacctccggcgccggctggggagacaactgt
gagatcttcccttgccctgtcgtggggactgctgaattcactgaaatgtgtcctagaggg
aaaggctttgtccccactggagaatcctcttatgatgctggtgatgagaactataaagat
gcagatgaatgcctgctctttgggcaagaaatctgcaaaaatggcttctgtctgaacact
cagcctggttatgaatgctactgtaagcaggggacatactatgatcctgtcaaattgcag
tgctttgatatggatgaatgtcaggaccccaatagttgtattgatggccaatgtgttaat
acagaaggctcttataactgcttctgtacccatccaatggtcctggatgcttcagaaaaa
agatgtatacgaccaactgaatcacatgaacaaatagaagaaactgatgtctaccaagat
ctgtgctgggaacatctgagtgatgagtatgtgtgtagccggcctcttgttggcaagcag
acaacttacactgaatgctgctgtttgtatggagaggcctggggtatgcagtgtgccctc
tgccccatgaaggattcagatgactatgcccagctgtgtaacatccccgtcacgggacgc
cggcggccatatggacgggatgccttggttgacttcagcgaacagtatgctccagaagct
gatccctattttattcaggaccgttttttaaatagcttcgaggagttgcaggctgaagaa
tgtggcatcctcaatggatgtgagaatggccgctgtgtgagggtgcaggaaggttatacc
tgtgactgttttgatgggtatcacttggatatggccaagatgacctgtgttgatgtaaac
gaatgtgatgagttgaacaaccggatgtctctctgcaagaatgccaagtgcatcaacacc
gagggctcctacaagtgtgtgtgtctgcctggctacgtgccttcggacaagcccaactac
tgcacgccattgagtaccgccttgaatttagaaaaagacagcgacctggagtaa
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