Prionailurus viverrinus (fishing cat): 125173726
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Entry
125173726 CDS
T09889
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04015
Rap1 signaling pathway
pviv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
125173726 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125173726 (RAPGEF6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
125173726
NCBI-ProteinID:
XP_047729180
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All DBs
Position
A1:complement(108959356..109151521)
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AA seq
1614 aa
AA seq
DB search
MNSPVDPGARQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSG
NQILFCSETVARCWYILLSGSVLMKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINYKGERQTITDDVDINSYLSLPADLTKMHITDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEEI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAVILEDGQELDSWYVILNGTVEITHPDGKVENLFMGNSFGITPTLDKQYMHGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLQSPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLNGGSEKGFGIFVEGVEPSSKAADAGLKRGDQIMEVNGQNFENITFAKAVEILRN
NTHLALTVKTNIFVFKELLSRTEQEKYGVPHIPKIAEKKSNRHSIQDVPGDIEQTSQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCHA
VHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNTHL
KEFEDIVNQETFWVASEILTEPNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
SVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAMMFRQRKKRWRSLGSLSQG
STNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDVDTDEEKFQMMSL
QWEPAYGTLTKNFNEKRSAKSSEMSPVPMRSAGQTAKAHLHQPHRVSQALQVPAVNLHPI
RKKGQAKDPATLCTNLPQKVLGTTEEIIGKKHPEDTISVASSLHSSPPASPQGSPRKGCT
LMPSTKSDNLSDSSHSEISSRSSIVSNCSVDSMSTALQDERCSSHAMAVPESTGPLEKTE
HSSGIGDHSQLGPGWTLSKPSLVKSLAVSSSMSNEEISHEHIILEAADSGRGSWTSCSSS
SHDNFQSLPNPKGWDFLNSYRQTHLDGPIVEVEPPDCEPYSCPKGCSRTCGQCKGSLETN
QMRQSWASSSSLSDTYEPNYGTVKRRVLESTPLESSEGLDPKDGTDPVYKTVTSSTEKGL
IVYCVTSPKKEDRYREPPPTPPGYMGISLADLKEGPHLHLRPPDYSVAVQRSKMMHNSLS
RLPPASLGSSPVACVPSKIVTQPQRHILQPSHPKLADVTDADSETDENEQVSAV
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcccgtggaccccggcgctaggcaggcgctgaagaagaagcctcccgagcgg
acccccgaggatttaaatactatttattcttatcttcatggaatggaaatactatcaaat
ctcagggaacatcagcttagattaatgtctgcaagagcacgctatgagagatacagtggc
aatcaaattcttttttgttcagaaactgttgcccgatgttggtatatcctgctttctgga
tctgtgcttatgaaagactccatggtcttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtagaaaat
tccaaagataatgaagatagtattctacaaagagaaattcctgccagacagtctcgacga
aggtttcggaaaattaattataaaggagaacgccaaaccattaccgatgacgtggacatt
aacagctatctttctcttccagccgatcttaccaagatgcacatcacagacaaccctcat
ccacaggtgactcatgtgtcttctagtcagtctggttgtagtatcgccagtgactctggg
agcagcagtttatctgatatttaccaggctacagaaagtgaggtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaagatgaggaagaggaagatgaagagatt
gatcgaacagatccactacaggggcgagatcttgttcgagaatgtcttgagaaagaacct
gcagacaaaactgatgatgatattgaacagttactggagtttatgcaccagctccctgct
tttgcaaacatgaccatgtctgtaaggagagaactctgctcagtaatgatttttgaagtg
gtagagcaggccggagctgttattctggaagatgggcaagagcttgactcatggtatgtt
attttaaacggcactgtagaaatcactcatccagatggaaaagttgaaaatctctttatg
ggaaatagttttggaattactcccactctggataagcagtatatgcatggagttgttagg
actaaagtagatgattgtcagtttgtctgcatagcccagcaggattattggagaatttta
aatcatgtggagaaaaacacccataaagttgaggaagagggagaaattgttatggtgcat
gaacaccgtgaactagatcggagcggaaccaggaaaggacacattgtaatcaaggcaaca
cctgaacgtctcatcatgcatttaatagaagagcattccatcgtggacccaacttatata
gaagatttcctactaacttacagaacatttcttcagagtcctttggatgttgggatcaaa
ctgttggaatggtttaaaattgacagcttaagggataaggtaacacggattgtgttatta
tgggtaaacaatcactttaatgattttgaaggtgatcctgctatgactcgatttctggag
gaatttgaaaaaaatctggaagatacaaaaatgaatggtcatctccggttattgaatatt
gcctgtgctgcaaaggccaagtggaggcaggttgtgctgcaaaaggcttcccgggagtcc
cctctgcatttcagccttaatggaggaagtgagaagggatttggtatttttgttgaagga
gtagaacccagtagcaaagctgctgatgcgggactgaaacgtggtgatcagataatggaa
gtaaatggacaaaactttgagaacattacatttgcaaaggccgttgaaattttaaggaat
aatactcaccttgcacttactgtgaagaccaacatttttgtgttcaaagagttacttagt
aggactgaacaagaaaaatatggagttcctcatattcctaaaattgctgaaaaaaaaagt
aatcgccattcaatccaggatgtaccaggagatatcgaacagacatcacaggagaaagga
aataagaaaataaaagcaaatactgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacggtttagtatcctgcctccaaaactgttcagtgatggaggcctgagccag
tcgcaagatgacagcattgtgggaacaagacactgcaggcacagtctggctataatgcct
attcctggaacactctcttccagcagccctgatctcctgcagcctaccaccagcatgttg
gatttttctaatccttcagatattcctgatcaagttataagagttttcaaagcagatcaa
caaagttgctacattatcatcagtaaagacactacagctaaagaagttgtttgtcatgct
gttcatgaatttggtttgactggtgcgtctgacacgtattctctctgtgaagtttctgtt
actcctgagggtgtcataaaacagagaagacttccggaccagttctccaaattagctgat
agaattcagctcaatggaaggtattatttaaaaaataacatggaaacagaaactttatgt
tcagatgaagatgcccaagaactagttaaggaaagccaactgtccatgctgcagctcagt
accattgaggtggccactcagctatcaatgagggactttgatttgtttcgtaatattgag
cctactgaatacatcgatgacctttttaagttagattccaaaacaggaaatactcacttg
aaagagtttgaggacattgttaaccaggagacattctgggttgcttcagagattttaact
gaaccaaatcagctcaaacgaatgaagattattaagcattttattaaaattgcacttcat
tgtagagaatgtaagaacttcaattccatgtttgcaataataagtggcttgaacctggca
tctgtagcacgactcagaggtacttgggaaaaattaccaagcaagtatgagaaacacctc
caggatctacaagacctttttgatccatctagaaacatggcaaaatatagaaatattctt
agtagtcaaagcatgcagcctccaattattccactcttccctgttgtcaagaaagatatg
acatttctacatgaagggaatgactccaaagtagatggtttagtgaattttgagaagcta
agaatgattgccaaggaaatccgtcaagttgttcgaatgacttctgctaacatggaccca
gctatgatgtttcgacagaggaagaagaggtggcggagtctggggtcattgagtcaaggc
agcacaaactctaacatgctagatgttcaaggaggtgctcacaagaaaagggcacgccgc
agctctctgctcaacgccaagaagctatacgaggatgcccaaatggcaagaaaagtgaag
cagtatctttccagtctggatgtagacacagatgaggaaaagtttcagatgatgtcattg
cagtgggagcctgcctatggtaccttgactaagaatttcaatgagaaaagatcggccaag
tcatcagaaatgtctccagtgcctatgagatcagcgggccaaacagctaaagcacatttg
catcagcctcacagagtgagccaggcactccaagtgccagctgttaatttgcaccccatc
aggaagaagggacaagcaaaagaccccgccacattatgtacaaatttacctcagaaagtt
ttagggacaactgaagaaataattggtaagaaacatccagaagatacgatctctgtggca
tcatccttacattctagtcctcctgcatctcctcaaggctctcctcgcaaaggttgtaca
cttatgccatcaactaaatctgacaacttgtctgactccagccatagcgaaatttcttca
cgatccagcatcgtgagcaattgttctgttgactccatgtctacagctctacaggatgaa
cggtgttcttcacatgctatggcggtccctgaatccactggaccattggaaaaaacagaa
cactcctcagggataggagaccatagtcagctgggccctgggtggacactgtcaaagcca
tctctagtcaagagtttagctgtgtcatcttctatgagtaatgaagagatttctcatgaa
catatcattttagaagcagccgatagtggtcgtggaagctggacttcctgttcaagcagc
tcccatgacaacttccaaagccttccaaacccaaaaggctgggattttttgaactcttac
cgacagacccatttggatggccccattgttgaagttgaaccccctgactgtgagccctat
tcctgtcctaaaggctgctcccgaacttgtggtcaatgtaaaggaagcctagagactaat
cagatgagacagagttgggcctcctccagttctctgtctgacacatatgaaccaaactat
gggacagttaaaaggagagtgttggagagcaccccacttgagtcctctgaaggcttggac
cccaaggatggcactgacccagtttataaaactgttacttcaagtacagaaaagggcttg
attgtgtactgtgtcacctcacccaagaaggaggataggtatagggagccacctcccact
cctccaggatacatgggcatttctttagcggacctaaaggaaggaccccacctacaccta
agacctccagattatagtgtggcagtgcagaggtcaaagatgatgcataacagcctctct
agacttccaccagcttctctcggtagcagccccgtggcctgtgttccatcgaagattgta
actcagcctcagaggcatattttgcaaccatcccatcctaaactagcagatgtgactgac
gcagatagcgaaacagatgaaaatgaacaggtctcagcagtctag
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